Oceanicola sp. D3: FHY55_04430
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Entry
FHY55_04430 CDS
T06139
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
ocd
Oceanicola sp. D3
Pathway
ocd03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
FHY55_04430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ocd03011
]
FHY55_04430
Ribosome [BR:
ocd03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
FHY55_04430
Bacteria
FHY55_04430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
RNase_II_C_S1
DUF3592
NHase_beta_C
Motif
Other DBs
NCBI-ProteinID:
QDC08532
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Position
846188..847867
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AA seq
559 aa
AA seq
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MAQNASMEEFEALLTESFEIDTPDEGSVVKGKVIAIEAGQAIIDVGYKMEGRVELKEFAN
PGEAPEIAVGDEVEVFLDRVENARGEASISRDKARREEAWDRLEKAYADEERVEGAIFGR
VKGGFTVDLGGAVAFLPGSQVDVRPVRDAGPLMGLKQPFQILKMDRRRGNIVVSRRAILE
ESRAEQRAEVIGKLTEGDTVDGVVKNITEYGAFVDLGGVDGLLHVTDMAWRRVNHPSEIL
SIGETIKVQVIKINKETHRISLGMKQLQDDPWDAVEAKFPLDSVHTGRVTNITDYGAFVE
LEPGVEGLVHVSEMSWTKKNVHPGKIVSTSQEVEVMVLEIDTAKRRVSLGLKQTMRNPWE
VFAETHPEGTEVEGEVKNITEFGLFIGLPGDIDGMVHLSDISWDERGEDAIQNYHKNDIV
QAVVTETDVEKERISLSIKALGGDKFAEAVGGVKRGQIITVEVTAIEDGGIEVEYEGMKS
FIRRSDLSRDRAEQRPERFGVGDKVDVRVTNVDSKTRRLGLSIKAREIAEEKEAVEQYGS
SDSGASLGDILGAALKQDD
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaacgcatccatggaggaattcgaagccctcctgactgaaagcttcgagatc
gacacgcccgacgagggctctgttgtcaaaggcaaggtgatcgccattgaggcgggccag
gccattatcgacgttggctataagatggaaggccgcgttgaactgaaagaatttgccaac
cccggcgaagctcccgagattgctgttggcgatgaggtcgaggtgttccttgatcgcgtc
gagaacgcccggggcgaggccagcatctcccgtgacaaggcccgccgcgaagaggcttgg
gaccgtctggagaaggcctatgctgacgaagagcgcgttgaaggcgcaatctttggccgc
gtgaagggtggctttaccgtcgatctcggcggcgccgtggccttcctgcccggctcccag
gttgatgtgcgccccgtgcgcgatgccggcccgctgatgggcctcaagcagccgttccag
attctcaagatggaccgtcgccgtggcaacatcgttgtgtcgcgccgcgcgatcctcgaa
gagtcccgcgccgagcagcgtgccgaagtgatcggcaagctgaccgagggcgacaccgtg
gacggcgtggtcaagaacatcaccgaatacggtgcgtttgttgacctcggcggcgttgac
ggcctgctgcacgtgaccgacatggcatggcgccgggtcaaccacccgagcgagatcctc
tccatcggtgagacgatcaaggtgcaggtcatcaagatcaacaaagagactcaccgcatc
agcctcggcatgaagcagctgcaggacgatccgtgggatgccgtggaagccaagttcccg
ctggactcggtgcacactggccgcgtgaccaacatcaccgactacggtgcgtttgttgag
ctggagcccggtgtggaaggtcttgtccacgtttccgagatgagctggaccaagaagaac
gtgcaccccggcaagatcgtttccacctcgcaggaagtggaagtcatggtgctggagatc
gacaccgcgaagcgtcgcgtgtcgcttggcctcaagcagaccatgcgcaacccgtgggaa
gtgtttgcagaaacgcaccccgagggcaccgaagtggaaggcgaggtcaagaacatcacc
gagttcggtctgttcatcggcctgcccggcgacatcgacggcatggttcacctcagcgat
atcagctgggacgagcgtggcgaggatgcgatccagaactaccacaagaacgacatcgtt
caggctgtggttaccgagaccgacgttgagaaggagcgcatctcgctctccatcaaggcg
ctgggcggtgacaagtttgccgaggccgttggtggcgtgaagcgtggccagatcatcacc
gtggaagtcacggcgatcgaggatggcggcatcgaggtggaatacgagggcatgaagtcc
ttcatccgccgctccgacctcagccgcgaccgtgccgagcagcgccctgagcgctttggc
gtgggcgacaaggttgacgtgcgcgtgaccaacgtcgacagcaagacccgccgtcttggc
ctgtcgatcaaggcccgcgagatcgccgaagagaaggaagccgttgagcagtatggctcg
tcggactccggtgcttcgctcggcgacattctgggcgccgcgctcaagcaagacgactga
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