Oceanicola sp. D3: FHY55_05445
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Entry
FHY55_05445 CDS
T06139
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
ocd
Oceanicola sp. D3
Pathway
ocd00630
Glyoxylate and dicarboxylate metabolism
ocd00680
Methane metabolism
ocd01100
Metabolic pathways
ocd01120
Microbial metabolism in diverse environments
ocd01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FHY55_05445
09102 Energy metabolism
00680 Methane metabolism
FHY55_05445
Enzymes [BR:
ocd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
FHY55_05445
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4_8
Fer4_9
Fer4
Fer4_17
Fer4_21
Fer4_10
Fer4_6
Fer4_16
Fer4_2
Fer4_4
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
QDC08716
UniProt:
A0A5B8BPL3
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All DBs
Position
1060147..1063095
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AA seq
982 aa
AA seq
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MVQRSSSRRGCPRPHRSVDPGGGPALPGALRRAPGGHHSQPEHAPTGDPPMKDLPTTVSF
TLDGKDVTAEAHETIWQVAKREGTAIPHLCYKDDPEYRSDGNCRACMVEIEGERTLAASC
KRRVSEGLKVQTGTDRVKTNRRLVFDLLASDMPSRDTSPDPEAHFWSQAELAGLQDTHFP
STRPGAKSEIPVDSIFRDASHPSIAVNLDACISCTLCERACRDVQVNDVIGMASRGTHNL
PVFDQADPMGLSSCVACGECVQACPTGALMEKTLLNDEATKRTEYAEKKVESVCPFCGVG
CQTELSVKDGKIIQVEGRKGPANRGKLCIKGRFGYDYVLSPERLTKPLIRRDDAPKDAKA
ELSTDRIHEVFREATWEEALQKASGGLKTIIDRDGGAALAGFGSAKGTNEEAYLFQKLVR
QGFGTNNVDHCTRLCHASSVAALMEGVGSGAVSAPFTDAEKSDCIIIIGARPEQNHPVAA
TYFKQAAKNGATLIVMDPRSQRLMRHATHGVIFKPGRDVALLNAMIHTIIEEGLTDEQYI
QGNTSGFEALKEKVKGFTPEEMAPICGVDADEIRTIARAFARAERGIIFWGMGISQHVHG
TDNSRCLIALSLITGHVGRPGTGLHPLRGQNNVQGASDAGLIPMFYPDYKSVEAPELIEK
YEDAWGRPLDHVRGLTVVEIMHAIHDGDIKGMYVQGENPAMSDPDQHHARAALASLEHLV
VQDIFFTETAWHADVILPASSQAEKLGTYTNSNRQVQLGRPVLPPPGEARQDWELIRDVA
NGIGCGWTYTDVPEVYAEMAALMPSLANISWERIEREGSVTYPAAAEDEPGQEVIFTEGF
PTEDGRARIVPTDLVPPDELPDDEFPLVLTTGRLLEHWHTGAMTRTSHALNAQEPEPVVS
MHPRDIGRMGFERGQQVTVETRRGDITLTLRADRDVTQGMLFIPFCFRDAPANFLTNPSL
DPFGKIPEFKFAAARIRAAESA
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggttcagcgttcatcttcccgccgaggttgcccccggcctcaccgaagcgtcgacccg
ggcggcgggccggcgctgcccggcgccttacggcgcgcaccgggcgggcaccactcgcaa
ccagaacacgctccaaccggagaccccccaatgaaagacctccccaccaccgtcagcttc
accctcgacggcaaggatgtcaccgccgaggcgcatgaaaccatctggcaggtcgccaag
cgtgaaggcaccgccatcccgcacctctgctacaaggacgatccggaataccgctccgac
ggcaactgccgcgcctgcatggtggaaatcgagggcgagcgcacccttgccgcctcctgc
aagcgccgcgtctccgaagggctcaaggtccaaaccggcaccgaccgcgtcaaaaccaac
cgccgcctcgtcttcgacctgctcgcctccgacatgccctcgcgcgacacctcgccagac
cccgaagcccacttctggtcccaggccgaactcgctggcctgcaagacacccacttcccc
tcaacccgccccggcgccaaatccgaaatcccggtcgactccatcttccgcgacgcctcc
cacccctccatcgccgtcaaccttgatgcctgcatctcctgcaccctctgcgagcgcgcc
tgccgcgacgtgcaggtgaacgacgtcatcggcatggcctcgcgcggcacccacaacctc
cccgtcttcgaccaggccgacccgatgggcctctcctcctgcgtcgcctgcggcgaatgc
gtgcaggcctgccccaccggcgcgctgatggaaaagaccctgctcaacgacgaggctacc
aagcgcaccgaatacgccgagaaaaaggtcgaaagcgtctgccccttctgcggcgtcggc
tgccaaaccgaactctccgtgaaggacggcaagatcatccaggtcgaaggccgcaaaggc
cccgccaaccgcggcaagctctgcatcaagggccgcttcggctatgactacgtgctctcc
cccgagcgcctcaccaagcccctgatccgccgcgacgacgcgccgaaagacgccaaggcc
gagctttccactgaccgcatccacgaggtcttccgcgaggccacatgggaagaggcgctg
caaaaagcctcaggcggcctgaaaaccatcatcgaccgtgacggtggcgcggcgctggca
ggcttcggctccgccaagggcaccaacgaagaggcctacctcttccagaagctcgtgcgc
caaggcttcggcaccaacaacgtcgatcactgcacccgcctctgccacgcctcctccgtg
gccgcgctgatggaaggcgtcggctccggcgccgtctccgctcccttcaccgatgccgaa
aagtccgactgcatcatcatcatcggcgcccgccccgagcaaaaccacccggtcgccgcg
acctacttcaaacaggccgccaaaaacggcgcgaccctcatcgtgatggacccgcgctcc
caacgcctcatgcgccacgccacccacggcgtcatcttcaagccgggccgcgacgtggcg
ctcttgaacgcgatgatccacacgatcatcgaagaggggctgacggatgagcagtatatc
caaggcaacacctccggcttcgaggcgctgaaagaaaaggtcaaaggcttcacgccggaa
gagatggccccgatctgcggcgtcgatgccgacgaaatccgcaccatcgcccgcgccttc
gcgcgtgccgaacgcggcatcatcttctggggcatgggcatctcccagcacgtccacggc
accgacaactcccgctgcctcatcgccctctcgctgatcaccggccacgtcggccgcccc
ggcaccggcctgcacccgctgcgcgggcaaaacaacgtgcagggcgcctccgacgcgggc
ctgatccccatgttctaccccgattacaaatcggtggaagcccccgagctgatcgaaaaa
tacgaagacgcctggggccgcccgcttgaccatgtgcggggcctcaccgtggtcgagatc
atgcacgccatccatgacggcgacatcaagggcatgtatgtgcagggcgaaaacccggcc
atgtccgacccagaccagcaccacgcccgcgccgcgctggccagcctcgaacacctcgtc
gtgcaggatatcttcttcaccgaaaccgcatggcacgccgacgtgatcctgcccgcctcc
tcgcaggccgagaaactgggcacctacaccaactccaaccggcaggtccaactcggccgc
cccgtgctgccgccccccggcgaggcccggcaggattgggagctgatccgcgatgtcgcc
aatggcatcggctgcggctggacctacaccgatgtgcccgaggtttacgccgaaatggcc
gccctcatgccctcgctcgccaacatcagctgggagcggatcgagcgcgaaggctccgtc
acctacccggcagcggcagaggacgagcccgggcaggaggtcatcttcaccgagggcttc
cccaccgaagatggccgcgcccgcatcgtcccgaccgacctcgtcccgcccgacgagctg
cccgatgacgagttcccgctggtgctcaccaccggccgccttctggagcattggcacacc
ggcgctatgacccgcaccagccacgcgctcaacgcacaagagccggagccggtggtgtcg
atgcacccgcgcgacattggccgcatgggttttgagcgtggccagcaagtcacggtcgaa
acccgccgcggcgacatcaccctcacccttcgggctgaccgggatgttacacagggcatg
ctcttcatccccttctgcttccgcgacgcgcccgccaacttcctgacgaacccaagcctc
gaccccttcggcaagatccccgagttcaagttcgccgccgcccgcatccgcgccgccgaa
agcgcatag
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