KEGG   Oceanicola sp. D3: FHY55_05780
Entry
FHY55_05780       CDS       T06139                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ocd  Oceanicola sp. D3
Pathway
ocd00010  Glycolysis / Gluconeogenesis
ocd00020  Citrate cycle (TCA cycle)
ocd00260  Glycine, serine and threonine metabolism
ocd00280  Valine, leucine and isoleucine degradation
ocd00310  Lysine degradation
ocd00380  Tryptophan metabolism
ocd00620  Pyruvate metabolism
ocd00630  Glyoxylate and dicarboxylate metabolism
ocd00640  Propanoate metabolism
ocd00670  One carbon pool by folate
ocd00785  Lipoic acid metabolism
ocd01100  Metabolic pathways
ocd01110  Biosynthesis of secondary metabolites
ocd01120  Microbial metabolism in diverse environments
ocd01200  Carbon metabolism
ocd01210  2-Oxocarboxylic acid metabolism
ocd01240  Biosynthesis of cofactors
Module
ocd_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ocd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ocd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ocd_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ocd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    FHY55_05780 (lpdA)
   00020 Citrate cycle (TCA cycle)
    FHY55_05780 (lpdA)
   00620 Pyruvate metabolism
    FHY55_05780 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    FHY55_05780 (lpdA)
   00640 Propanoate metabolism
    FHY55_05780 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    FHY55_05780 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    FHY55_05780 (lpdA)
   00310 Lysine degradation
    FHY55_05780 (lpdA)
   00380 Tryptophan metabolism
    FHY55_05780 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    FHY55_05780 (lpdA)
   00670 One carbon pool by folate
    FHY55_05780 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocd04147]
    FHY55_05780 (lpdA)
Enzymes [BR:ocd01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     FHY55_05780 (lpdA)
Exosome [BR:ocd04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   FHY55_05780 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored HI0933_like FAD_binding_2 NAD_binding_8 GIDA Lys_Orn_oxgnase Thi4 DAO AlaDh_PNT_C FAD_binding_3 3HCDH_N Lycopene_cycl UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: QDC08774
UniProt: A0A5B8BR92
LinkDB
Position
complement(1135923..1137317)
AA seq 464 aa
MSAYDVIIIGAGPGGYVCAIRCAQLGMKTAVVEGRETLGGTCLNVGCIPSKAMLHASHML
HEAEHNFAEMGLKGKSPSVDWKQMLAYKQKTVDQNTGGIEFLFKKNKIDWLKGWGSIPEA
GKVKVGDEVHEAKHIIIATGSEPASIPGAEVEIDEKTVVSSTGALELGKVPGEMVVVGGG
VIGLELGSVYARLGSKVTVVEFLDAITPGADAEVAKNFQKILKKQGLSFVMGAAVNKVET
KGGKATVHYKLRKDESAHELKCDTVLVATGRKPYVDGLGLDELGVKMTKRGQVEVDDHFQ
TAVKGVYAIGDAIPGPMLAHKAEDEGTALAEMLAGQKPHINYGLIPGVIYTAPEVASVGE
TEETLKEKGKAYKVGKFPFMGNARAKSVHQAEGFVKMLADKETDRILGCHIIGPSAGELI
HEICVAMEFGASAEDVARTCHAHPTFSEAVRESALACGDGAIHA
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgtctgcatatgacgtgatcatcatcggcgccggccccggcggctacgtctgcgccatt
cgctgcgcccaactgggcatgaagacggccgttgtcgaaggccgcgagacgctgggcggc
acctgcctcaacgtcggctgcatcccgtccaaggccatgcttcacgccagccacatgctg
catgaggcggagcacaactttgccgagatggggctgaagggcaaaagccccagcgtcgat
tggaagcagatgctggcctacaagcaaaagacggtggaccagaacaccggcggcatcgag
tttctgttcaagaaaaacaagatcgactggctgaagggttggggctccatccccgaggcg
ggcaaggtgaaggtgggtgacgaggtgcatgaggccaagcacatcatcatcgccaccggc
tccgaacctgcgagcatccccggtgccgaggtggagattgacgagaagacggttgtcagc
tccaccggcgcgctggagctgggcaaggtgcccggtgagatggtcgtggtcggcggcggg
gtgatcgggctggagcttggctcggtttatgcccggcttggcagcaaggtgacggtggtg
gagttcctcgatgcgatcacccccggcgcggatgccgaggtggccaagaacttccagaag
attctgaagaagcaggggctctcttttgtgatgggggccgctgtcaacaaggtggagacc
aagggcggcaaggccacggtgcactacaagctgcgcaaggacgagagtgcccatgagctg
aagtgcgacacggtgctggtggccacgggccgcaagccctacgtcgacgggctgggactg
gacgagctgggcgtgaagatgaccaagcgcgggcaggtcgaggtggatgaccacttccag
accgccgtgaagggcgtctatgccatcggtgacgcgatccccggcccgatgctcgcccac
aaggccgaggacgaaggcaccgcgctggccgagatgctggcgggccagaagccgcatatc
aactacgggctcattccaggcgtcatctacactgcgccagaggtggcgagcgtgggtgaa
accgaggagacgctgaaggagaagggcaaggcctataaggttggcaagttccccttcatg
ggcaacgcgcgggccaagtcggtgcaccaggccgagggcttcgtgaagatgctcgccgac
aaggaaacagaccgcatcctcggctgccacatcatcggcccctcggcgggtgagctgatc
cacgagatctgtgtggcgatggagtttggagcctccgcagaggacgtggcccgcacctgc
cacgcccatccgaccttctccgaagccgtgcgcgagagcgctctggcctgtggcgatggg
gccattcacgcctga

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