Oceanicola sp. D3: FHY55_05890
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Entry
FHY55_05890 CDS
T06139
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ocd
Oceanicola sp. D3
Pathway
ocd00020
Citrate cycle (TCA cycle)
ocd00190
Oxidative phosphorylation
ocd00650
Butanoate metabolism
ocd00720
Other carbon fixation pathways
ocd01100
Metabolic pathways
ocd01110
Biosynthesis of secondary metabolites
ocd01120
Microbial metabolism in diverse environments
ocd01200
Carbon metabolism
Module
ocd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ocd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ocd_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FHY55_05890
00650 Butanoate metabolism
FHY55_05890
09102 Energy metabolism
00190 Oxidative phosphorylation
FHY55_05890
00720 Other carbon fixation pathways
FHY55_05890
Enzymes [BR:
ocd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
FHY55_05890
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
GIDA
Pyr_redox_2
Thi4
FAD_oxidored
FAD_binding_3
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
QDC08796
UniProt:
A0A5B8BPU6
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All DBs
Position
1155906..1157711
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AA seq
601 aa
AA seq
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MAAYEYETHTYDVVVVGAGGSGLRATLGMAEQGLKTACVTKVFPTRSHTVAAQGGIAASL
SNMGPDHWQWHMYDTVKGSDWLGDTDAMEYLAREAPKAVYELEHYGVPFSRTEEGKIYQR
PFGGHTTEFGEGPPVQRTCAAADRTGHAILHTLYGQSLKHNAEFYIEYFAIDLIMGDDGA
CQGVVCWKLDDGTIHVFRAKMVVLATGGYGRAYFSATSAHTCTGDGGGMAARAGLPLQDM
EFVQFHPTGIYGSGCLITEGARGEGGYLTNSEGERFMERYAPTYKDLASRDVVSRCMTME
IREGRGVGKEKDHIFLHLNHLPPETLAERLPGISESARIFAGVDLTKEPIPVLPTVHYNM
GGIPTNYWGEVLNPTADDPDAIAPGLMAVGEAGCASVHGANRLGSNSLIDLVVFGRAAAI
RAAKVVDPASANPDLNTASVDAALDRFDKLRHADGSISTADLRDEMQRTMQADAAVFRTD
KTLAEGVEKMKAVAAKMDDIKVTDRSLIWNSDLMETLELTNLMPNALATIVGAEARKESR
GAHAHEDYPDRDDNEWRKHSLATVEGNEVNLSYRPVHLDPLSKHEDGGIDLKKIAPKARV
Y
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttacgaatacgagacgcacacctatgacgtggtggttgtgggcgcaggcggc
tctggcctgcgagcaaccctcggcatggccgagcaggggctgaaaaccgcctgtgtcacc
aaggtcttcccgacccgctcgcacaccgtggcggcgcagggtggcattgccgcgagcctc
tccaacatgggccccgaccactggcagtggcacatgtatgacaccgtgaagggttccgat
tggctgggcgacaccgacgcgatggaatatctcgcccgcgaggcgcccaaggcggtttac
gagctggagcactacggcgtgcccttctcccgtaccgaggaaggcaagatctaccagcgc
cccttcggcggccacaccaccgagtttggcgagggcccgcccgtgcagcgcacctgcgcc
gccgccgaccgcaccggccatgcgatcctgcacacgctctacggccagtcgctcaagcac
aacgccgaattctacatcgaatatttcgccatcgacctcatcatgggcgatgacggcgcc
tgccagggggtggtctgctggaagctcgatgacggcaccattcacgtgttccgcgccaaa
atggtagtgctggccaccggcggttatggccgcgcctacttctccgccacctccgcccac
acctgcaccggcgacggcggcggcatggccgcccgcgctgggctgccgcttcaagacatg
gagttcgtccagttccaccccaccggcatctacggctccggctgcctcatcaccgagggc
gcgcgcggcgagggcggttatctgaccaactccgagggcgagcgcttcatggagcgctat
gcgcccacctacaaggatctcgcctcgcgtgacgtcgtcagccgctgcatgacgatggaa
atccgcgagggcaggggcgtgggtaaggagaaagatcacatcttcctccacctcaaccac
ctgccgcctgaaaccttggccgagcgtctgcccggcatctccgagagcgcccgcatcttc
gccggggtcgatctgacgaaagagccgatcccggtgctccccaccgtgcactacaacatg
ggcggcatcccgacgaactactggggcgaggtgctgaaccccacggcggatgaccccgat
gccatcgcgcccggcctcatggccgtgggcgaagcgggctgtgcctcggtgcatggcgcc
aaccgcctcggctccaactcgctgatcgacctcgtggtattcggccgcgccgccgcgatc
cgcgccgcaaaggtggtggacccggccagcgccaaccccgacctcaacaccgcctccgtc
gacgccgcgctcgaccgcttcgacaagctgcgccacgccgatggctccatctccactgcc
gatctgcgcgacgagatgcagcgcaccatgcaggccgatgcggcggtgttccgcaccgac
aagacgctggccgaaggcgtggagaagatgaaggccgtggccgccaagatggacgacatc
aaggtgaccgaccgctccctcatctggaactccgacctgatggaaacgctggagctgacc
aacctcatgcccaacgcgctcgccaccatcgtcggcgccgaggcccgcaaggaaagccgc
ggggcccacgcccacgaggattaccccgaccgtgacgacaacgagtggcgcaagcactcc
ctcgccaccgtcgagggcaacgaggtaaacctcagctaccgccccgtgcacctcgacccg
ctctccaagcacgaagacggcggcatcgatctcaagaagatcgcccccaaggcgcgggtc
tattga
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