KEGG   Oceanicola sp. D3: FHY55_07990
Entry
FHY55_07990       CDS       T06139                                 
Symbol
tssI
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
ocd  Oceanicola sp. D3
Pathway
ocd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ocd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FHY55_07990 (tssI)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ocd02044]
    FHY55_07990 (tssI)
Secretion system [BR:ocd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FHY55_07990 (tssI)
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 Gp5_C DUF2345
Other DBs
NCBI-ProteinID: QDC09184
LinkDB
Position
1565384..1567468
AA seq 694 aa
MDGAYTQDRNLGWVETDLGKDQLLLRKFTGTDRLNELFEYTVRVFAPDGLDTDALMGTHC
GVFLNSNNHGEIPFDGIVTEVEWRQHQEEGDEYDLTLRPWFWLAGLRRQQRIFHEKSVDE
ILEEVFSAWSGTGPQTHRIDLTRSYPKLEYTVQYGESDLAFARRMMERFGISFHFSHARG
NHCMVLTDAHESMDELPGLSREYRPVGEVYQKDEEHFWEWREARGVTTGKVKLTDYNFKT
PVASMLTEQVGEAAHAHADIESYDYPGVYPDAGEGRDVVGLRTTQERAGDYRTHAKGDVL
SLKAGMRCVATGHYAQFTKGEEHLCLEASHSFTAEAYRSGSDGGADKERAYEGRYTLIPI
SRPFAPQRITATPVIYGPQTARVVGEGEIDCDEYGRILVRFHWDLADAYSMRCRVSQNWA
SKGWGGMVIPRIGMEVVVEFLEGDPDKPLVTGCVYNGRNTVPYALPANKTVSTFKSDTHQ
GSGYNEFRFEDEKDREEVWMHAQKDHNTVIENDESHRIGHDRSKTVGNNQVENIGVNKTI
GVGKDHTESIGQDARHTIARDVYYSVGQNQFTTFGKDHIEKVGNILKQSVFADHLETVGR
NYTGEIAGKMTLDVGQSITTNTTKHTLMAGQKFVIAGPGGKITIDGSGITLEAPVINLKG
AVNMGGSGSAQVPTLQLAANEALPLAEECPEKDK
NT seq 2085 nt   +upstreamnt  +downstreamnt
atggacggcgcttacacgcaggacagaaacctcggttgggttgagaccgatctcgggaaa
gaccaactgcttctccgcaaattcacgggcaccgaccggctgaatgagctctttgagtat
acggtgcgcgtctttgcgcccgatgggctggataccgatgcgctgatgggcacccattgc
ggcgttttcctcaactccaacaaccacggcgaaatcccctttgacgggatcgtcaccgag
gtggaatggcgccagcatcaggaagagggcgatgaatatgatctgaccctgcggccctgg
ttctggctggccgggctgcggcgtcagcagcggatcttccatgaaaagagcgtggatgag
atcctcgaagaggtgttctcggcctggtccggcaccggcccgcagacccaccggatcgac
ctgactcgtagctatcccaagctggaatacaccgtgcaatacggcgagtccgacctcgcc
ttcgcccggcgcatgatggagcgcttcggcatctccttccacttctcgcacgcacgcggc
aaccactgcatggtgctgaccgacgcccatgaaagcatggatgaactgcccggtctcagc
cgcgagtatcgcccggtcggcgaggtctatcagaaggacgaggagcacttctgggagtgg
cgcgaggcgcggggcgtgaccaccggcaaggtcaagctgaccgattacaacttcaagacc
ccggtcgcctcgatgctgaccgagcaggtgggcgaggcggcccatgcccatgccgatatc
gagagctacgattaccccggcgtctaccccgacgcgggcgaggggcgggacgtggtcggg
ctgcgcaccacgcaggagcgcgcgggcgattaccgcacccatgccaagggcgatgtgctc
agcctgaaggcgggcatgcgctgcgtggcgaccggccattacgcccagttcaccaagggc
gaggagcacctttgccttgaagccagccacagctttaccgccgaggcctaccgctcgggc
agcgatggcggcgccgacaaggagcgcgcctatgagggccgctacacgctgatccccatc
tcccgcccgtttgcgccgcaacggatcaccgccacgccggtgatctacggcccccagact
gcacgcgtggtgggcgaaggcgagatcgactgcgacgaatacggccgcatcctcgtgcgc
ttccactgggacctggcggatgcctactccatgcgctgccgggtcagccagaactgggcc
tccaaaggctggggcggcatggtgatcccccgcatcggcatggaagtggtggtggagttc
ctcgaaggcgaccccgacaaaccgctggtgacggggtgcgtgtataacgggcgcaacacc
gtgccttacgcgctgcccgccaacaagaccgtctccaccttcaaatccgatacccatcag
ggctcgggctacaacgagtttcgctttgaagacgagaaggaccgtgaagaggtctggatg
catgcgcagaaagaccacaacactgttatcgaaaacgacgagagccaccggatcgggcat
gaccgctccaagaccgttggcaacaatcaggttgaaaacatcggggtgaacaagacgatc
ggcgtgggcaaggaccacaccgaaagcattggtcaggacgcccgccacaccatcgcgcgc
gatgtctattattccgtcgggcaaaaccagttcaccacctttggcaaggaccacatcgag
aaggtcgggaatatcctcaagcagagcgtgtttgccgaccatctggaaaccgtggggcgc
aactacaccggcgagatcgcgggcaagatgacgctggatgtgggtcagtcgatcaccacc
aacaccaccaagcacacgctgatggcggggcagaagtttgtgatcgccgggccggggggc
aagatcaccatcgacgggtcgggcattacgctggaagcgcctgtgatcaacctcaagggc
gcggtcaacatgggcgggtccggctcggctcaggtgcccaccttgcagttggcggccaac
gaggctttgcccctcgccgaggaatgcccagagaaggacaagtga

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