Oceanicola sp. D3: FHY55_08125
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Entry
FHY55_08125 CDS
T06139
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
ocd
Oceanicola sp. D3
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Gene cluster
GFIT
Motif
Pfam:
LysM
FliD_N
Motif
Other DBs
NCBI-ProteinID:
QDC09208
UniProt:
A0A5B8BTP5
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Position
1590931..1592658
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AA seq
575 aa
AA seq
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MAMLAQPGPRVGAVRHYRGRAMSAWNSLSPVLRGGLTAGALALAGAGLWLWQGGVAPEAE
PGAEVSSGEDASGAVEAEAGSTEEKGGTVAGSGAAEELQGAPEPRAADEPEQAAETPAPA
SPPDPAASDAMDEAQAAQSTPAGDAPPQGEARLPSFDLVRIEPGGAAVIAGNAAPGDAVW
LLLDGAPIADATADASGAFVALTNIQPGDVPRVLTLLAKGEAGERRSEASVIVAPAVTVA
NADEQPSDAPLETASLGEDSAPASLAETPPAETEAQPSPPEAPTPPDMDDAPAIASAAAS
PAGEESEAAAEPSSEPGEADAPQAAEAAPEGPAEGPATPDAPATTAANPGNAPVTGPGEP
ATSPQLPSAETPETAAAEPLPATKTARAAAPAVSGEGAQLLVASGEGLRVLQPSATAAEV
PLRVETIGYREGAVTLSGRGTGGPSDLRIYLDNDPVAVAPLDTDGTWTAELSGVTPGTYT
LRVDQLAQNGKVTGRFETPFLRESEAALARNAPAPTDAEGLAVSVITVQPGYSLWAIASD
RYGDGMDYHKVLEANRGQIRDPDLIYPGQIFDLPD
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggctatgcttgctcaacccgggccaagagttggcgcggtgaggcattatcgaggaagg
gcaatgtcggcttggaattccctctcccccgtgctgcggggcggcttgacggcgggcgcg
cttgcgctggccggtgcgggcctgtggctgtggcagggcggtgttgctccggaggcggag
ccgggtgccgaagtgtcctcaggtgaggatgcgagcggggctgttgaggctgaagcgggc
agcaccgaagaaaagggcggaacggtcgctggcagcggagcggcagaggagctgcaaggc
gcacccgagccgcgcgctgccgacgaaccggagcaagcagcagagacgcccgcgcccgca
agcccaccagacccggcagccagcgatgccatggacgaggcccaagcggcacagagcaca
ccggctggtgatgcgccgccgcagggcgaggcgcgcctgcccagctttgacctcgtccgc
atcgaacccggtggcgcggcggtcattgcgggcaatgccgcgccgggcgatgccgtgtgg
ctcctgctcgacggcgcgcccatcgcagatgcaacagccgacgcctcgggggccttcgta
gcactcaccaacatccagcccggcgatgtgccgcgcgtgctgacgcttctcgccaagggc
gaggcgggcgagcggcgatcggaagccagtgtgattgttgcgcctgccgtcaccgtggcg
aatgccgacgaacagccaagcgacgcgccgcttgaaaccgcctctctcggagaagatagc
gcgcccgcgtcactggccgagaccccgcccgcagaaaccgaggcccaaccctccccgccc
gaagcccccacgccgccggacatggacgatgcgcctgccatcgcctctgccgcggccagc
ccggcaggtgaggaaagcgaagcggcagcggagccgtcttctgagccgggcgaagccgat
gcgccgcaggcggccgaagctgcgccggaagggcccgcagagggccccgcgacgcccgat
gcgcccgccaccacggctgccaacccaggcaatgcgcccgtcaccggccccggcgagccc
gccacatcgccacaactcccctcggctgaaaccccggaaaccgccgcagccgagccgctg
cctgccacaaaaaccgcccgcgctgctgcccccgctgtctccggcgagggcgcacagctt
ctggtggccagtggcgaggggctgcgggtgcttcaacccagcgccacggctgcagaagtg
ccgctgcgggttgagaccatcggctaccgtgaaggcgcggtcaccctttcgggccggggc
accggcgggccgtcagacctgcggatctacctcgataacgacccggtcgccgtggcgccg
cttgataccgatggcacatggaccgccgagttgagcggcgtgaccccgggcacctacacg
ctgcgggtcgaccaattggcgcaaaacggcaaggtaacaggacggtttgagacgcccttc
ctgcgggaaagcgaggcggcacttgcccgcaacgcgcccgcgccgacagatgccgagggg
ctcgccgtttcggtcatcaccgtgcaaccgggctattcgctctgggccatcgcctctgac
cgctacggcgacggcatggactatcacaaggtgctcgaagcaaaccggggccagatccgc
gacccggacctgatttatccgggccagatcttcgatctgccggattga
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