Oceanicola sp. D3: FHY55_08135
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Entry
FHY55_08135 CDS
T06139
Name
(GenBank) efflux RND transporter permease subunit
KO
K18989
multidrug efflux pump
Organism
ocd
Oceanicola sp. D3
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocd02000
]
FHY55_08135
Transporters [BR:
ocd02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FHY55_08135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
QDC09210
LinkDB
All DBs
Position
complement(1594648..1598454)
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AA seq
1268 aa
AA seq
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MTGIVDWAAARARMILAFVAMSILVGWATYLSLPKEGEPDIEIPAVFVSVPFPGISAADA
EKMLVKPMETELSDLDGLKTMTGVATEGYANVVLEFEFGWDKSATLADVRAAMNTAGANF
PDGADNYTIGEINFSEFPIIIVNLTGALPERTLVKVAKDLQDSLEGLEPVLEATLAGHRD
EMLEVVIDPLKLESYNVTAAELINVVVNNNQLIAAGEVETPGGTFSVKIPASFESSQDVL
QLPVKVNGDSIVTLGDLADIRLTFEDRSGTARFNGVNTVALQVSKKKGYNIIDTAAAIRE
VVEAERAKWPPELRDAIQVGTSNDQSRVVKSMVSQLEGSVMTAIALVAIVVLAALGIRPA
ILVGIAIPISFLLCFIFLSIMGITVSNIVMFGLILAVGMLVDGAIVVVEYADKRIRDGVG
PMHAYVEAAKRMFWPIVSSTATTLCAFLPMLFWPGVAGQFMGMLPVTLIFVLSASLLVAL
VYLPVLGGVSGRMSRTFHNASEALRRFPWWVRALLVVPSLYLLFIAALQCINPGYLFGGT
SPLPGAAAVVPGLLLFITAAFLSTITLDAARLERRAKRVQAGHRRSPFGWLITAIAGNPI
MPLVTVGAVGFFVFSTFIYYGANNNGVDFFVESEPEQAIVYVRARGNLSLEEKDEMVREV
EEAMAHIPGIESAFSFAGEGGLNSNTGGSQSPLDTVGQIQLELIPWEDRPEYARTHDVPL
AELDGDVILERIEEAVLEIPGIQPEILNLAMGPGAGKPIHLRLSGDNFAALEESVATVRS
YLGDMPGVIDLEDTTPLPGIDWQIDVDVEKAGRYGADVATVGAMVQLVTRGILLDTMRVD
SSDEEIEIRVRLPYEDRVLSTLDELKVRTPDGQVPLSNFITRKPVPKIGRIDRVDQRRIY
DVKADVAPGLSKLVGEDGALLAVMPTEEARAAAEGSGEFSGASVVAVNANERIGVITEWL
TGEQSPLPTGIDWEWTGDQEDQEESGQFLMSAFGMALGMMFIILLAQFNSFYNAVLVLLA
VVLSTAGVLWGMLLLGQPFSIIMTGTGIVALAGIVVNNNIVLIDTYQEYSAYMPRLEAVI
RTAEARLRPVLLTTITTMAGLTPMMLGLSLDFINGGYSLDSPTALWWKQLATAVVFGLGT
ATVLTLVFTPSMLALRIWASKGAYVGLRSIGKVALGRSSRVARDAALSRAAKKVKRPEII
WSEEEMPEETVEAEAVPEAQVVPEERAPEANRAAPEATDKAEDTGEDTGDGAEKDEDKPG
GSHIRAAE
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcattgtcgattgggccgccgcccgcgcccggatgatcctcgccttcgtggcg
atgtcgatcctcgtgggttgggcgacctatctgagcctgcccaaggaaggcgagccggat
atcgagattccggctgttttcgtgtccgtccccttccccgggatttcggcggcggatgcc
gaaaagatgcttgtgaaaccgatggaaaccgagctttcagacctcgacgggctgaagacc
atgacgggcgtggccaccgagggctatgccaacgtggtgctggagttcgagtttggctgg
gacaagtccgccacgctggccgatgtgcgcgccgcaatgaacacggccggggcgaatttt
cccgatggggcagataattacaccatcggcgagatcaacttttccgaatttccgatcatc
atcgtcaacctcaccggcgccctgccagagcgcacgctggtgaaggtggcgaaagacttg
caggatagcctcgaagggctggagccggtgctggaggccacactggccgggcaccgcgac
gagatgctcgaagtggtgatcgacccgctgaagctggaaagctacaacgtcaccgccgcc
gagctgatcaacgtggtggtgaacaacaaccagctcatcgctgccggcgaggtggaaacc
cccggcggcaccttctcggtgaagattcccgccagcttcgagagcagccaagacgtgctg
caactgccggtaaaggtgaacggcgacagcatcgtcaccctaggcgaccttgccgacatt
cgcctgaccttcgaagaccgctccggcaccgcccgcttcaacggggtcaacacggtggcg
ctgcaggtttccaagaagaagggctacaacatcatcgacaccgccgccgcgatccgcgag
gtggtggaggccgagcgcgccaaatggccgcccgagctgcgcgatgctattcaggtgggc
acctccaacgaccagagccgggtggtgaagtcgatggtcagccagcttgagggctcggtg
atgacggcaatcgcgctggtggccattgtcgtgctggccgcgctcggcatccgccccgcc
atccttgtcggcatcgcgattccgatcagctttctgctgtgcttcatcttcctgtcgatc
atgggcatcaccgtgtccaacatcgtgatgttcggcctgatcctcgcggtgggcatgctg
gtggacggtgccatcgtggtggtggaatacgccgacaaacgaatacgcgacggcgtgggg
ccgatgcacgcctatgtcgaggccgccaagcggatgttctggcccatcgtcagctccacc
gcgaccacgctctgcgctttcctgcccatgctcttctggcccggtgtggccgggcagttc
atggggatgctgcccgtcaccctgatcttcgtcttgtctgcctcgttgctggtggcgctg
gtctacctgccggttctcggcggcgtctcgggccggatgagccggacgttccacaacgcc
tccgaggcactgcgccgcttcccgtggtgggtgcgcgcgctgctggtggtgccctcgctc
tacctgctcttcattgccgcgctgcaatgcatcaacccgggctatctcttcggcggcacc
tcgcccctgcccggcgcggcagccgtggtgccggggcttttgctcttcatcaccgcagcc
ttcctgtcgaccatcacgcttgacgccgcccggctggagcgccgcgccaaacgggtgcaa
gccgggcaccgccgttcgccctttggctggctcatcaccgcgatcgcgggcaacccgatc
atgccgctcgtcaccgtgggcgcggtgggtttcttcgttttctcgacgttcatctattac
ggcgccaacaacaacggcgtcgatttctttgtcgagagcgagccggagcaggccattgtt
tatgtccgagcgcgcggcaacctctcgctggaagagaaggacgagatggtgcgcgaggtc
gaagaggccatggcgcatatccccggcatcgaaagcgcgttttcctttgccggtgagggt
gggctgaactccaacaccggcggcagccagtcgccgctggatacggtgggccagatccag
ctggagctgatcccctgggaggaccggcccgaatacgcccgcacccatgatgtaccgctg
gccgagcttgatggcgacgtgatccttgagaggatcgaagaggcggtgctggaaattccc
ggcatccagccggaaattctcaacctcgccatgggtccgggcgcgggcaagccgattcac
ctgcggctctcgggcgataacttcgcggcgctggaagagtctgttgccacggtgcgcagc
taccttggcgacatgcccggcgtcatcgaccttgaagacaccactcccctgcccggcatc
gactggcagatcgacgtggatgtggaaaaggccgggcgctacggcgctgatgtggccaca
gtgggcgcgatggtgcagcttgtcacccgcggcatcctgctcgacacaatgcgcgtggac
agctcggatgaggaaatcgaaatccgcgtgcggcttccctatgaagaccgggtgctttcc
acgctggacgagttgaaggtccgcaccccggacgggcaggtgccgctctccaatttcatc
acccgcaagccggtgcccaagatcggccggatcgaccgggtggaccagcgccgcatctac
gacgtgaaagccgatgtagccccgggcctgtccaaactcgtgggggaggatggtgccctt
ctggccgtcatgcccaccgaagaggcccgcgccgccgcagaaggcagcggtgagttcagc
ggtgcatcggttgtggccgtcaacgccaacgagcgcatcggcgtgatcaccgagtggctc
accggcgagcaaagccccctgcccaccggcatcgactgggaatggaccggcgatcaggaa
gaccaggaagagagcggccagtttctgatgagtgccttcggcatggcgcttggtatgatg
ttcatcatcctgctggcgcagttcaacagcttctacaacgcggtgctggtgcttctggcc
gtggttctttcaaccgccggtgtgctttggggcatgctgctgcttggccagccgttctcg
atcatcatgaccggcaccggcatcgtcgcgctggcggggatcgtggtgaacaacaacatc
gtcttgatcgacacctatcaggagtattccgcctacatgccccggctcgaagcggtgatc
cgcaccgccgaggcccggctgcgcccggttctgctgacgaccatcaccacaatggcgggc
ctgaccccgatgatgcttggcctttcgctggatttcatcaacggcggctactcgctcgac
agccccaccgcgctttggtggaaacagctcgccacggcggttgtgtttggcctcggcacg
gccaccgtgctgacgctggtcttcacgccgtccatgctggccctgcgtatctgggcctcc
aagggggcctacgtgggcctgcgcagcatcggcaaggtcgcccttgggcgctccagccgg
gtggcgcgtgacgcagcgctgagccgcgcggcgaagaaggtgaaacgccccgagatcatc
tggtcggaagaggaaatgccggaagagactgtcgaagccgaggcggtgccggaggctcag
gtggtccctgaggaaagagcgccggaggccaatcgagcggctccagaggccaccgacaag
gccgaggacacgggcgaggacacgggcgacggtgccgagaaggatgaggacaagcccggc
ggatcccacatccgcgcggcggagtag
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