KEGG   Oceanicola sp. D3: FHY55_09135
Entry
FHY55_09135       CDS       T06139                                 
Symbol
radA
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
ocd  Oceanicola sp. D3
Brite
KEGG Orthology (KO) [BR:ocd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocd03400]
    FHY55_09135 (radA)
DNA repair and recombination proteins [BR:ocd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     FHY55_09135 (radA)
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB ChlI DnaB_C AAA_16 AAA_22 AAA_30 AAA_24 AAA SLFN-g3_helicase AAA_5 CobU NTPase_1 AAA_14 nSTAND3 Lon_C ATPase_2 AAA_29
Other DBs
NCBI-ProteinID: QDC09399
UniProt: A0A5B8BY45
LinkDB
Position
complement(1803998..1805362)
AA seq 454 aa
MAKSLAFTCTACGASHSKWKGQCDACGAWDTIQEEAPLSSGPKGKGLGARKGTTIPLAEL
SSPEAPPPRTMSGLDEFDRVLGGGLVPASATLVGGDPGIGKSTLLLQAAARFAMAGQKTI
YISGEEASAQVRMRARRLGLAEAPVKLATETSLRDILTTLDAERPDLCIIDSIQTMWSDT
VDSAPGSVSQVRAACHELTQFAKRRGTAVILVGHVTKEGAIAGPRVVEHMVDTVLYFEGE
RGHQFRILRAVKNRFGPADEIGVFEMTGEGLAQVLNPSALFLSDNETPAPGTAVFAGIEG
TRPVLVEFQALVAPAPAGQARRSVVGWDSGRLAMILAVLEARCGIPFAGMDVYLNVAGGL
RVSEPAADLAVAAALLSAREDVPLPPRMVVFGEISLTGALRPSSQTENRLKEAQKLGFSC
ATLAEGSKSTSSGGMDLRKMSDLTGFVGEMFGAG
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggccaaatcccttgctttcacctgcaccgcctgcggcgcgtcccactccaaatggaag
ggccaatgcgacgcctgcggcgcgtgggacaccattcaggaagaggccccgctgtcctcc
ggccccaagggcaaggggctcggcgcgcgcaagggcaccaccatcccgctggccgaactc
tcctcacccgaggccccgccgccccgcaccatgtccggcctcgacgagtttgaccgggtg
ctcggcggcggcctcgttcccgcctcggccaccctcgtgggcggcgatccgggcatcggc
aaatccaccctgctgctgcaagccgccgcccgctttgcgatggccgggcagaagaccatc
tacatctccggcgaggaggcctccgcgcaggtccgcatgcgcgcccgccgcctcgggctg
gccgaagcgccggtcaaactggccaccgaaacctccctgcgcgacatcctcaccacgctg
gatgccgaacgccccgacctctgcatcatcgattcgatccagaccatgtggtccgacacg
gtcgactcggcccccggctcggtttcgcaggtccgcgcggcctgccacgagctgacacaa
ttcgccaaacggcgcggaaccgccgtcatcctcgtgggccatgtcaccaaggaaggtgcc
atcgccggcccccgcgtcgtcgagcatatggtcgataccgtgctctacttcgaaggcgag
cgcggccaccagttccgcatcctgcgcgcggtgaaaaaccgcttcggcccggcggatgaa
atcggcgtgttcgagatgaccggcgagggcctcgcccaagtgctcaatccctccgccctc
ttcctgtcagacaatgaaacacccgcccccggcaccgccgtctttgccgggatcgagggc
acccgccccgtgctggtggagtttcaggccctcgtcgcgcccgcccccgcaggacaggcc
cgccgctcggttgtgggctgggactcggggcgactggccatgatcctcgccgtgctggaa
gcccgctgcggcatccccttcgccgggatggatgtctatctcaacgtcgcgggcggcctg
agggtgtcagagcccgccgccgacctcgccgttgccgccgccctgctctcggcccgtgaa
gatgtgcccctgccgccacgcatggtggttttcggcgagatcagcctcaccggcgccctc
cggccctcctcgcaaaccgaaaacaggttgaaagaggcgcaaaaacttggtttctcctgc
gcaacgctggcagaggggtcaaaatctacctccagcgggggcatggacctgcgcaagatg
tcagacctcacgggtttcgtgggcgagatgttcggcgcaggctga

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