Oceanicola sp. D3: FHY55_09140
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Entry
FHY55_09140 CDS
T06139
Name
(GenBank) lytic murein transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
ocd
Oceanicola sp. D3
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ocd01011
]
FHY55_09140
Enzymes [BR:
ocd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FHY55_09140
Peptidoglycan biosynthesis and degradation proteins [BR:
ocd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FHY55_09140
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Paralog
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
DUF6197
PG_binding_2
Terminase_7
Motif
Other DBs
NCBI-ProteinID:
QDC09400
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Position
1805591..1806727
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AA seq
378 aa
AA seq
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MTLSVTSRRGFLVSTAAMGLLSACGGVNGFDAVPQSAPDPAMRPVANAAFDAWVARFKGR
AVGAGISQGVVDRAFASAGFIPGVIERDRNQAEFKRSFEDYLSLVASEKKVAMGRAAFSR
QRGRLNAIEAKYGVPAEICCAIWGVESTYGTRRGDIPVISACATLAYEGRRGAFFEKQLI
AALRILQSGDTTPERMVGSWAGAMGHTQFIPTSYQLFAVDFTGDGRRDIWSDDPSDALAS
TAAYLAKNGWRRGERWGSETTSGGLQPDPGGPRFAVGHNFNVIKRYNNSDNYALAVGYLS
DRIAGRGGLKAEFGPDRYGLTQKDRMRLQAGLTRAGFDAGTADGVLGNKTAAAIRAYQAA
NGLPVTGEPSRALLQRLG
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacattgagcgtgacgagcaggcgcggatttttggtatcgacggcggcgatggggctt
ttgagcgcctgtggcggggtgaacggctttgatgccgtcccccagagcgcgcctgaccct
gcgatgaggccggtggccaatgcggcgtttgacgcatgggtggcgcggttcaagggccgt
gccgtgggcgcaggcatttcgcagggcgtggtggaccgggcctttgcgagcgcgggcttc
atccccggggtgatcgagcgcgacaggaatcaggcggagttcaaacgctcgttcgaggat
tacctttcgctggtcgccagcgagaagaaggtggcgatgggccgggcggcgttttcgcgc
cagcgcgggcggctcaatgcgattgaggcgaaatacggggttccggcggagatatgctgt
gcgatctggggtgtggaaagcacctatggcacgcggcgcggcgatattccggtgatctcg
gcctgtgcgacgctggcctatgaggggcggcgcggcgcgttttttgaaaagcagctgatc
gctgcgctgcgcatcctgcaatcgggcgacaccacgcccgagcggatggtgggcagctgg
gccggtgcgatggggcacacacagtttatccccacgagctaccagctgtttgcggtggat
ttcaccggcgacgggcggcgggacatttggagtgacgatccgagtgatgcgctggcctcg
acggcggcctaccttgccaagaacggctggcggcgcggtgagcgctggggcagcgagacc
accagtgggggccttcagcccgatccgggcgggccgcgctttgccgtggggcacaacttt
aatgtcatcaagcgctacaacaactctgacaactatgctctcgcggtgggctacctcagc
gacaggatcgccgggcggggcgggttgaaggccgagtttggccccgaccgatacgggctg
acgcagaaggaccggatgcggttgcaggccggtctgacgcgtgccgggtttgatgcgggc
accgccgatggggtgctgggcaacaagacggcggcggcgatccgggcctatcaggcggcg
aacgggttgccggtgacgggagagccctcgcgcgcgttgttgcagcgcttgggctga
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