Oceanicola sp. D3: FHY55_09280 Help Entry FHY55_09280       CDS       T06139                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism ocd  Oceanicola sp. D3 Pathway ocd03018   RNA degradation Brite KEGG Orthology (KO) [BR:ocd00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     FHY55_09280  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ocd03019]     FHY55_09280 Messenger RNA biogenesis [BR:ocd03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      FHY55_09280 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 Motif Other DBs NCBI-ProteinID:  QDC09427 LinkDB All DBs Position 1829492..1831159 Genome browser AA seq 555 aa AA seqDB search MSKERLIYLPLGGAGEVGMNAYVYGYGKPGAERLILVDIGVTFPDMDGTPGVDLIFPDMT WLKENRDRLDAIFITHGHEDHVGGIGHFWADLRAPVYCRRFTAALAVRKMDEQGQDVEHV NAVGPYPEMIEAGPFKVSFLPVSHSIPESSGLVIDSPAGRVVHTGDFKLDGNPVVGEAFD PELWNEVAKPGVQALTCDSTNIMSPHPSRSEATLPPAIIDLVEKAEGMIVCTTFASNVAR VKTLAEAGAKAGRSVCLLGRAMKRMVSVAIDTGVLEKFPHTVTPEEAVDIPRENLMLIVT GSQGERRAASAQLARGKFLGLTMKEGDTFLFSSKTIPGNERGVLRIVNSFSEMGVDVIDD RSDLYHVSGHANRPDLEAMHDLMHPKILVPMHGEHRMLREHAKVGEAKGIPSIVAVNGSM VDLTGPKPEIVEYIETGRTYLDGSVKIGALDGVVRDRIRVALNGQVFLTLILDENDEPLG EPWAELVGLPETGRSRAPLVELIEAAADGFMGRADDKVLTDDDKLEEGLRRVVRQTAVEE IGKKPEVVIVISRLS NT seq 1668 nt NT seq  +upstreamnt  +downstreamnt atgagcaaagaacggctgatctatctccccctcggcggggccggggaagtggggatgaat gcctatgtctacggctacggcaagccgggggcggagcggctgatccttgtcgatatcggc gtgaccttccccgatatggacggcaccccgggggtggatctgatctttcccgacatgaca tggctgaaggaaaaccgcgaccggctggacgcgatctttatcacccacggccatgaagac catgtgggcggcattggccacttctgggccgatctgcgcgcgccggtctactgccgccgc ttcaccgcggcgctggcggtgcggaagatggatgagcaggggcaggacgtggagcatgtg aatgcggtcggcccttacccggagatgatcgaggcggggccgttcaaggtgtctttcctg ccggtcagccactcgatccccgaaagctcggggctggtgatcgacagcccggcgggccgg gtggtgcacactggcgacttcaagctcgacggcaaccccgtggtgggtgaggcctttgac ccggagctttggaacgaggttgccaagcccggcgtgcaggcgctgacctgcgacagcacg aacatcatgagcccgcatccgagccgctcggaggccacgctgccgccggcgatcatcgac ctcgtggaaaaggcggagggcatgattgtttgcaccacctttgcctccaacgtggcgcgg gtgaagactctggccgaggcgggcgcaaaggcgggccggtcggtttgcttgctgggccgc gcgatgaagcggatggtatcggtggcgattgacaccggcgtgctggagaagtttccgcac acggtgacgcccgaggaggcggtggatattccgcgcgagaacctcatgctgatcgtgacc ggctcgcagggcgagcggcgggctgcatcggcgcagctggcgcgcggcaaatttttgggg ctgacgatgaaggagggcgataccttcctgttttcgtccaagacgattccgggcaacgag cgcggcgtgctgcgcatcgtcaactccttctcggagatgggcgtggatgtgatcgacgac cggagtgatctttatcacgtgtccggccatgccaaccggcctgaccttgaagcgatgcac gacctgatgcacccgaagattctggtgccgatgcatggcgagcaccggatgctgcgcgag catgcgaaggtgggggaggccaagggcattccgtcgatcgtggcggtgaacggctcgatg gtggacctgaccgggccgaagcccgagatcgtggaatacatcgagaccgggcggacctat ctggatggctcggtcaagattggcgcgctcgatggcgtggtgcgcgaccggatccgggtg gcgctgaacggccaggtgtttttgacgctgatccttgacgaaaacgacgagccgctgggc gagccctgggcagagctggttggcttgccggaaacgggccgctcgcgcgcgccgcttgtg gagctgatcgaagcggcggcggacggctttatgggccgggccgatgacaaggtgctgacc gatgacgacaagctggaagagggcttgcggcgcgtggtgcggcagacggctgtggaagag atcggcaagaagcccgaggttgtgattgttatcagccggttgagctga

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