Oceanicola sp. D3: FHY55_10140
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Entry
FHY55_10140 CDS
T06139
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ocd
Oceanicola sp. D3
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocd03032
]
FHY55_10140 (gyrA)
03400 DNA repair and recombination proteins [BR:
ocd03400
]
FHY55_10140 (gyrA)
Enzymes [BR:
ocd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FHY55_10140 (gyrA)
DNA replication proteins [BR:
ocd03032
]
Prokaryotic type
DNA Topoisomerases
FHY55_10140 (gyrA)
DNA repair and recombination proteins [BR:
ocd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FHY55_10140 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QDC09580
LinkDB
All DBs
Position
complement(1998819..2001599)
Genome browser
AA seq
926 aa
AA seq
DB search
MSDTPEPPENTEDNPPERPEHHGPSITIEEEMKASYLDYAMSVIVSRAIPDLRDGLKPVH
RRILFAMHEVGNTHDKPYRKSSRPVADAMGKYHPHGDQAIYDALVRMAQDFSMSLPLLDG
QGNFGSMDGDKAAAFRYTEVRMDKSAGALLADIDKDTVDFIDNYDGKDQEPVVLPARFPN
MLVNGAGGIAVGMATNIPPHNLGEVIDATLALIEDPDLDSMALTEYVPAPDFPTGGIILG
RSGARKAYLEGRGSVVIRAKTRTEEVRKDRYAIVVDEVPYQVNKAAMIEKIAELVRDKKL
EGISGIADESDRHGVRVVIELKRDATPEVVLNQLFRFTQLQTSFGCNMLALNGGRPETLT
LRGFLTAFIGFREEVVARRTAYELRKARERSHILCGLAVAVSNVDEVVATIRASADAAEA
REKLMTRRWPAEAIEGYIRLIDDPSHTMNDDGTYNLSEMQARAILELRLQRLTQIGVKEV
TDELEELAGKIKDYLDILRSRDRIMEIISNELKEVRDEFAVPRRTEIVDWSGDMDDEDLI
EREEMVVTVTQSGYIKRTPLADFRAQKRGGKGLSGGDLKEEDVVTNLFVANTHTQLLFFT
TDGMAYKLKTWRLPQGGRTSRGKAIVNILPIPQGVSVAAIMPVDRPEEEWNDLQIMFCTD
KGTVRRNRLSDFTNVKANGKIAMKFEDENAGMSLINARICSEDDDVMLVTDAGRAIRFPT
TDVRVFNSRNSVGVRGIKLAEGDKVVSMSVIRHFEASSEERVAYLKQRRLMAGLTEEEEP
DEEEEAVAEGQLSQERYAEMSAAEDLILTITASGAGKISSSHDYPIRGRGGLGVTAWTKG
MPHGPIVACFPVDMSDQVMLATSTGQSIRCPVDGISFRSRSAGGVKVFNTGKGEEVVSVA
WIAEQDEDVEEASADTADGSEGSEQE
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacgccagaacctcctgaaaatacagaggataatccgcccgaacggcccgaa
caccacgggccgtcgattacgattgaggaggagatgaaggcctcctacctcgattatgcg
atgagcgtgatcgtcagccgtgcaattcccgacctgcgcgacgggctgaagccggtgcac
cggcgtattctctttgcgatgcacgaggtgggcaacacccacgacaaaccctatcgtaaa
tcctcgcgccccgtggccgatgcgatgggcaaatatcacccgcatggcgaccaggcgatc
tatgacgcgctggtacggatggcgcaggatttttcgatgtcgctgccgctgctcgatggg
cagggcaactttggctcgatggacggcgataaggccgcggccttccgttataccgaggtc
cggatggacaagtcagccggcgcgctgctggctgacattgataaagacaccgtcgatttc
atcgacaactacgacggcaaggaccaagagcctgtcgtcctccctgcccgcttccctaat
atgctggtcaacggcgcggggggcattgccgtgggcatggccaccaacatcccgccgcac
aatcttggcgaagtgatcgacgcgacgctggcgctgatcgaagacccggacctcgattca
atggcgctcaccgaatatgtgcctgcgcccgacttccccaccggcggcatcatccttggg
cgctccggcgcgcggaaggcctatctggaggggcgtggttcggttgttatccgtgccaag
acccgcaccgaggaagtgcgcaaggaccgctacgcgattgtcgtcgacgaggtgccctat
caggtcaacaaggcggcgatgatcgaaaagatcgccgaactggtgcgcgacaagaagctt
gaaggcatttcgggcattgccgacgaatccgaccggcatggcgtgcgcgtggtgatcgaa
ctgaagcgcgatgccacgcctgaggtggtgctgaaccagctgttccgctttacccagctg
caaacctcctttggctgcaacatgctggcgctgaacggcgggcggcctgaaacgctgacc
ctccgcggctttctcacggccttcatcggcttccgcgaagaggttgtggcgcgccgcacc
gcttatgagctgcgcaaggcgcgggaacgcagccacattctgtgtggccttgctgtggcg
gtctcgaacgtggacgaggtggtggccaccattcgggccagtgccgatgccgcagaggcc
cgcgaaaagctgatgacgcgccgttggccggctgaggcgattgagggctacatccggctg
atcgacgaccccagccacacgatgaacgatgatggcacctataacctgtcggaaatgcag
gcccgggccattcttgagctgcggctccagcggctgacccagatcggggtgaaggaagtc
accgacgagctggaagagctggccggcaagatcaaggattaccttgatattctgcgctcg
cgcgaccggatcatggagatcatctccaacgagctgaaagaagtgcgcgacgagttcgcc
gtgccgcgccgcaccgagattgtcgactggtccggcgacatggacgacgaagacctgatc
gaacgcgaagagatggtcgtgaccgtcacgcaatcgggctacatcaagcgcaccccgctg
gccgatttccgcgcgcagaagcgtggcggcaagggcctttcgggcggcgacctcaaggaa
gaggatgttgttaccaacctctttgtcgccaatacccacacgcagctgctgttcttcacc
accgatggcatggcctacaagctgaagacatggcgcctgccgcagggcgggcgcacctcg
cgcggcaaggcgatcgtgaatatcctgccgatcccgcagggcgtttcggttgccgccatc
atgccggtggaccgccccgaggaagagtggaacgaccttcagatcatgttctgcaccgat
aagggcaccgttcggcgcaaccgcctgagcgacttcaccaacgtgaaggcgaacggcaag
atcgccatgaagttcgaggatgagaacgcgggcatgagcctgatcaatgcccgcatctgc
tcggaagacgatgacgtgatgctggtgacggacgctggccgggccatccgcttcccgacc
actgatgtgcgggtgttcaactcgcgcaactcggtcggtgtgcgcggcatcaagctggct
gagggtgacaaggtggtgtcgatgtcggtgatccggcacttcgaggccagctccgaagag
cgtgtggcctacctcaaacagcgccgcctcatggccgggctgaccgaggaggaagagccc
gacgaggaagaggaagctgtggccgagggccagctttcgcaggagcgctatgcagagatg
tcggctgcggaagacctgatcctgacgatcaccgcgagtggcgcgggcaagatctcatcc
tcgcatgattacccgatccgtggccgtggcggcctgggcgtgactgcatggaccaagggc
atgccccatggcccgatcgtggcctgcttcccggtggatatgtcggaccaggtgatgctc
gccacatccaccggccaatccatccgctgccctgtagatggcatctcgttccggtcgcgc
tctgcgggcggggtgaaggtgttcaacaccggcaaaggcgaagaggtggtttcggttgcc
tggatcgccgagcaggatgaggacgtggaagaggcaagcgccgacactgcggacggcagc
gagggaagcgagcaggaatga
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