KEGG   Oceanicola sp. D3: FHY55_10780
Entry
FHY55_10780       CDS       T06139                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
ocd  Oceanicola sp. D3
Pathway
ocd02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ocd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FHY55_10780
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:ocd02022]
    FHY55_10780
Two-component system [BR:ocd02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   FHY55_10780
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 Mg_chelatase cREC_REC FleQ AAA_16 AAA MCM AAA_7 nSTAND3 OKR_DC_1_N GFO_IDH_MocA
Other DBs
NCBI-ProteinID: QDC09699
UniProt: A0A5B8BYX1
LinkDB
Position
2128280..2129686
AA seq 468 aa
MTDILIVDDERDIRELVGDILRDEGFQTRLAGNSDDCMAEINEAPPALMILDIWLKDSRM
DGIDILKTVKRDNPDIPIVIISGHGNIEIAVAAIKQGAYDFIEKPFNIDQLMVVIRRAME
TSRLRRENSQLRRKEVSVTDMVGNSTAFKALKSQLDKVTKSNGRVMLTGPAGSGKEVAAR
YIHANSSRASSPFVSVNSASIEPDRMEEVLFGRESDARGVEPGLLEQAHGGVLYFDEVAD
MPLGTQSKILRVLVDQQFQRVGGADKVRVDLRVISSTNRDLEAEIARGTFREELYHRLNV
VPIRVPGLEERREDIPELARHFITEFNASQGLSARELSEEADALLQTMHLPGNVRQLKNI
IERALILGETTDPIDARELQGGESQEDDDGRVVLSGGLATLPLREARELFEREYLLTQIN
RFGGNISRTATFVGMERSALHRKLKSLGVVTSTKAGARVAHIESQAAE
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgaccgatattctgattgtagacgacgagcgcgacatccgcgaattggtaggagacatc
ctgcgcgacgaggggtttcagacccggctcgcgggcaactccgacgactgcatggccgag
atcaacgaagcgccgcctgcgctgatgatcctcgacatctggctgaaagacagccggatg
gatggaatcgacatcctgaaaacggtgaaacgcgataaccccgatattccgatcgtcatt
atatcggggcatggcaacatcgagatcgcggtggccgcgatcaagcagggggcctacgac
tttatcgagaagcccttcaacatcgaccagctgatggtggtgatccgccgcgcgatggaa
acctctcgcctgcgccgcgaaaactcgcagctccgccgcaaggaggtgagcgtcaccgat
atggttggcaattccaccgccttcaaagcgctgaagagccagctggataaggtcaccaaa
tccaacgggcgggtgatgctgacggggcctgccggctcgggcaaggaagtggcggcgcgc
tacattcacgccaactcgtcacgcgcatcttcgcctttcgtgtcggtcaactcggcgtct
atcgagcccgaccggatggaagaggtgctgtttggacgcgagagcgatgcccgcggcgtg
gagccgggcctgctggagcaggcccacggcggcgtgctctatttcgacgaggttgcggat
atgccgcttggcacccagtccaaaattctgcgggtgctggttgaccaacagtttcagcgg
gttggcggcgccgacaaggtgcgggtcgatctgcgggtgatctcctcgaccaaccgtgat
ctggaggccgaaattgcgcgcggcactttccgtgaagagctgtatcaccggctcaacgtg
gtgccgatccgggtgccggggctggaggagcggcgcgaggatatcccggaactggcgcgg
catttcatcaccgaattcaacgccagccagggcctttcggcgcgggagctttcggaagaa
gccgatgcgttgctgcaaaccatgcacctgccgggcaacgtgcggcagctcaagaacatc
atcgagcgggcgctgatccttggcgaaaccaccgacccgattgatgcgcgggagttgcag
ggcggtgagagccaggaagacgacgatggccgcgtcgtgctgtcgggcgggctggcaacc
ctgccgctgcgcgaggcacgggagctgtttgagcgggagtatctgctgacccagatcaac
cggttcggcggcaatatttctcgcaccgcgacctttgtgggcatggagcgttcggccttg
caccgcaaactgaagtcgctcggtgttgtgacctcgaccaaggcgggcgcacgcgtggcg
catatcgagagccaagcggcggagtag

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