Oceanicola sp. D3: FHY55_11320
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Entry
FHY55_11320 CDS
T06139
Name
(GenBank) PAS domain S-box protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
ocd
Oceanicola sp. D3
Pathway
ocd02020
Two-component system
ocd02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FHY55_11320
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FHY55_11320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ocd02035
]
FHY55_11320
Bacterial motility proteins [BR:
ocd02035
]
Flagellar system
Chemotaxis proteins
MCPs
FHY55_11320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
PAS_4
PAS
PAS_9
PAS_3
PAS_8
Collagen_mid
ALIX_LYPXL_bnd
HAMP
dCache_1
ABA4-like
DUF948
Motif
Other DBs
NCBI-ProteinID:
QDC09799
UniProt:
A0A5B8BZ61
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All DBs
Position
2236506..2239712
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AA seq
1068 aa
AA seq
DB search
MLSNMKLRTKLPLLIFLIVAVTVAGFLGLLAMEGWKNAERSAYARLDAALEKDRAALQGW
VDTIRSDLVVNSTEATVTSALQKLTGAFAAIEDPASDLQRLYIEENPHPVGEKHLYDFAR
DGSGYSIAHRRYHGFFRALQQVRGYYDVFLMDADGNVIYSVFKELDFATNVVEGPWAESG
LGEVYRGAVSQAGAEERVFFVDYAPYGPSNGAPAGFAGIAITREDGTLQGVLAVQMPTDQ
VASLISQSAGIQEIFAGSDMKQRNTAGLAAIEPLDDEAVRRALQGEVGRLTGPIHTGETG
LAAYGPVDFGSFIWAVSAQMTDEAAFGGINRLLTKAAIGGTILLLLATAVGFALSRGIVG
PVTAVRNGLQGLTRGEYSHAVSGSARGDELGEMARSAETLRDKLQGAQAAEQDNIFRGAG
FQASSAPMLMLDSDLRVSYANAAVEAFFDKHADTFAAGGLYSGTGELTGQGIDQLMPNPD
SLQRSLDTPEDLPRTLFFRLDDTRFSMRVGAVVDDQGAPIGTVVELANATQEFMDRALMT
SINRFLATIKMDRKAKVFEVNGTMAEVLGCAPEDLLGKGAPELFQFDPQSDAKTGTVLER
LEQGENVFGLFSLRGPNGELRWLQGGFSPVRDTDGQVAMFLFMGSDVTEDREKLAEAERE
QSRVAEAQTQVVDSLRVGLMALAEGNLTKLLDEQFSEGYDELRINFNEAASKLREAIAMV
TENAGAIHREVGEIATSADDLSRRTERQATTLEETAAALDELTSSVRSAAQGADRANQMV
TEARGNAEQGGKVVSEAVAAMGQISSSSDQISKIITVIEDIAFQTNLLALNAGVEAARAG
EAGRGFAVVASEVRALAQRSSDAAREISGLISSSGDHVKRGVDLVGQTGEALREIVTSVT
DIAGHVSEIAKSAKEQSSGLDEINTAMNQLDQVTQQNAAMFEQTNAASQSLSGEADLLKQ
TVSRFEIGKVADITEEREATVTPAPAAAAQPLAAKEPAGDKMEADDAEATAQPSSPAEKP
DQTAHTSDTATPPVAPTPTFRSGRPSVPRSDGSAALAIPPDDEDWEEF
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcaacatgaaactgcggacaaagctgccgctgctgatttttcttatcgtcgct
gtcaccgtggccggatttctcggccttttggccatggaagggtggaagaacgcggagcgc
tcggcctatgcccgccttgatgccgcgctggaaaaggaccgtgcggccctgcagggctgg
gtggataccatccgcagcgatctcgtggtgaattctaccgaagccacggtgacctcggcg
ctgcaaaagctcaccggtgcctttgccgcgattgaagacccggccagtgatctgcagcgg
ctttatatcgaggagaacccgcatcccgtgggggagaagcacctttacgacttcgcccgc
gatgggtcgggctattctatcgcgcaccgtcgctatcacggcttctttcgggcgctccag
caggtgcgtggctattatgacgtcttcctcatggatgccgatggcaacgtgatttacagc
gtcttcaaggagctcgactttgctaccaacgtggtggaggggccctgggccgaaagcggg
cttggagaagtgtatcgcggcgctgtctcccaggcaggcgcagaagagcgggtgtttttc
gttgattacgccccctatgggccatcgaacggcgcgccagcaggctttgccgggatcgca
attacccgcgaagacggcacgttgcagggtgtgctggctgtgcaaatgccaaccgatcag
gtcgcttcgctgatatcgcagagtgcagggattcaggagatcttcgccggaagcgacatg
aagcaacgcaacacggcggggctggcggcgattgagcctctggacgatgaggcggttcgc
cgcgcgctgcaaggcgaagttgggcgcctgaccgggccgatccataccggtgagacgggg
ctggccgcctatgggcctgtcgactttggcagctttatctgggccgtctcggcgcaaatg
accgatgaggctgcttttggcgggatcaatagattgctgaccaaagccgcgattggcgga
acgatattgctgctgctggcaacggcagtggggttcgccctgtctcgcgggatcgtcggg
ccagtgacggcagtgcgcaacgggttgcaggggctgacgcggggcgaatactcccacgcc
gtatctggcagcgcacgcggggacgagcttggcgagatggcgcgcagcgccgaaaccctg
cgcgacaaacttcagggcgcccaggccgcggaacaggacaacatcttccgtggcgccggt
tttcaggccagctctgcgccgatgctcatgctcgattccgatcttcgcgtcagctacgcc
aatgccgccgttgaagcgttcttcgacaaacacgccgatacctttgcggcgggcgggctc
tatagcggcactggcgagctgacggggcagggaattgaccagttgatgccaaacccggac
agcctgcagcggtccctcgatacgccagaagatctgccgcgcacgctgttcttccggctc
gacgacacccgcttttccatgcgcgtgggcgcggtggtggatgatcagggtgccccgatt
ggcaccgttgtggagctggcgaacgcgacacaggaatttatggatcgggcgctgatgacc
tccatcaaccgtttcctggccaccatcaagatggaccgcaaggcgaaggtcttcgaagtc
aacggcacgatggctgaggttcttggctgtgcccctgaggatttgctgggcaagggcgcg
ccagagctcttccaattcgatccgcagagcgatgccaaaaccggaacggttttggagcgg
ttggagcagggcgagaacgtgtttggcttgttcagcttgcgcggcccgaatggcgagttg
cgctggcttcagggcgggttttccccggtgcgcgataccgatgggcaggttgcgatgttc
ctgttcatgggctccgacgtcacggaggaccgcgaaaagctcgcagaggccgagcgggag
cagagccgcgtggccgaagcacagacacaggtggtcgacagcctgcgcgtggggctcatg
gccttggcagaaggcaacctgaccaagctgctcgatgagcagttttccgagggctatgac
gagctgcgcatcaacttcaacgaggcggcctccaagctgcgcgaggccatcgccatggtg
acggagaacgcgggcgcaatacaccgggaggtgggcgaaattgccacctctgccgatgat
ctttcacgccgaacggagcgtcaggcgacgacattggaagagaccgccgccgcgcttgat
gaactcacctccagcgtccgatccgccgcacagggcgccgatcgtgccaaccagatggtg
acggaggcgcgcggcaatgcggagcagggcggcaaggtggtgagcgaggctgttgcggcg
atgggccagatctccagcagctctgaccagatttccaagatcatcacggtgatcgaggac
atcgcctttcagacaaatctgttggcactcaacgccggggtcgaggcggcgcgcgcgggc
gaagccgggcgcggctttgccgtcgtcgcctcggaagtgcgcgcattggcacagcgcagc
tcggatgcggcacgggaaatctccggcctgatttcctcttcgggagatcacgtgaaacgc
ggggtcgatcttgtgggtcagacgggcgaggcccttcgggaaatcgtcaccagcgtgacc
gacatcgcaggccatgtctcggaaattgcgaaatcggccaaggagcaatcgagcggcctt
gacgagatcaataccgcgatgaaccagctcgatcaggtgacacagcaaaatgcagcgatg
ttcgagcagaccaatgccgcaagccagtccctttctggcgaagccgacctcttgaagcaa
acggtaagccgctttgaaatcggcaaagtcgctgacatcacagaggaaagggaggccacc
gtaaccccggctcctgcagctgccgcacagcctctcgccgccaaagaacctgccggcgat
aagatggaggcagatgacgctgaggcaactgctcaaccgtcttcaccggcagaaaagccc
gaccaaacagcccacacgtcagataccgccacaccgcccgtcgccccaacacccactttc
cgcagtggacgcccctctgttccccggagtgatggttcagccgcgctggccatccccccc
gatgacgaggactgggaagaattctag
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