Oceanicola sp. D3: FHY55_11540
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Entry
FHY55_11540 CDS
T06139
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
ocd
Oceanicola sp. D3
Pathway
ocd00240
Pyrimidine metabolism
ocd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
FHY55_11540
Enzymes [BR:
ocd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
FHY55_11540
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
QDC09841
UniProt:
A0A5B8BS30
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All DBs
Position
complement(2284939..2285862)
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AA seq
307 aa
AA seq
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MKLKITEEVADALAENRPVVALESTIITHGMPYPQNVETARAVEDDIRAAGAVPATIAVL
EGALCAGLTEAQLDALGQATGVAKLSRADIAHCLASGGTGATTVAATMIGARLAGIEVFA
TGGIGGVHRGAELSFDISADLQELAKTPVSVVAAGAKAILDINKTLEVLETLGVPVITMG
QAEFPAFWSRSSGLPSPLSAETAAEVAQAHVMRGQMGLEGGQLVANPIPREAEIPAEELA
PVIAEALAAAEAEQIAAKAVTPFLLDRIFHATEGRSLTANIALVRHNARLAAEIAGEIAQ
MRAETVR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttgaagatcaccgaagaagtcgctgatgcgcttgctgaaaaccgccccgtggtt
gctctggagagcaccatcatcacccatggcatgccctatccgcagaatgtggaaaccgcc
cgcgcggtggaggatgatatccgcgcggccggtgcggttccggccaccatcgcggtgctg
gagggcgcactctgtgcagggttgaccgaggcgcaactggacgcgctggggcaggcaacc
ggcgtggccaagctctcgcgcgctgacatcgcccattgcctcgccagcggcggcaccggg
gccaccacggtcgccgccacgatgatcggggcgcggctggcagggatcgaagtgttcgcc
accggcggcatcggcggggtgcatcgcggggccgagctgagctttgatatttccgccgac
cttcaggaactggccaaaacacccgtaagcgtggtggccgccggggcaaaggccattctg
gacatcaacaagaccctagaagtgcttgaaacccttggcgttccagtcatcaccatgggg
caggcagagtttccggccttctggtcgcgcagctccggcttgccctcgccgctcagcgcc
gaaactgccgccgaggtggcgcaggcgcacgtgatgcgcgggcagatgggccttgagggc
gggcagctggtcgccaatccgattccgcgcgaggccgaaatccccgccgaggagctggca
ccagtgatcgccgaggcgctggccgctgccgaagccgagcagatcgccgccaaggcggta
acgcccttcctgctcgacaggattttccacgccaccgaggggcgctcgctgaccgcaaat
attgccctcgtgcgccacaacgctcggcttgctgccgaaatcgcaggcgaaatcgcccaa
atgcgggcagaaacggtgcgttaa
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