Oceanicola sp. D3: FHY55_12055
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Entry
FHY55_12055 CDS
T06139
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
ocd
Oceanicola sp. D3
Pathway
ocd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FHY55_12055
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ocd01007
]
FHY55_12055
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocd03016
]
FHY55_12055
Enzymes [BR:
ocd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
FHY55_12055
Amino acid related enzymes [BR:
ocd01007
]
Aminoacyl-tRNA synthetase
Class I (G)
FHY55_12055
Transfer RNA biogenesis [BR:
ocd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FHY55_12055
Prokaryotic type
FHY55_12055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
DALR_2
tRNA-synt_1f
tRNA-synt_1
CysS_C
PDCD10_N
Motif
Other DBs
NCBI-ProteinID:
QDC09932
LinkDB
All DBs
Position
complement(2380871..2382265)
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AA seq
464 aa
AA seq
DB search
MNIYLHNTKTRKKELLEPVEPGRVGMYVCGPTVYDRAHIGNARPVIVFDVLFRLLRHVYG
AENVRYVRNFTDVDDKIIARAEESGREIGQITEETSRWYLEDMAAVGALEPTDMPRATDW
IGAMVAMIEGLVEAGHAYAAEGHVLFRVRSYEAYGALSGRSVDDMIAGARVEVAPYKEDP
MDFVLWKPAKAGEPGWESPWGKGRPGWHIECSAMADALLGASFDIHGGGNDLMFPHHENE
IAQSKCAHPEGEFARIWMHNEMLQVEGKKMSKSLGNFFTVRDLLDQGVPGEVIRFVFLGT
HYRKPMDWTEKKRQEAEATLRDWRGLVAGAEETGPDTAVAEALADDLNTAGAITRLHAMA
KEIAANPQKDCFYEKGTFLASARLMGILTEELAGWNAAPGVDLSAYAERLGALREAAMEN
KDFSAVDTLKAALIEAGVEVKMSRLGVDLIVKPEFDASKLEGLL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctatctgcataatacgaaaacccggaagaaagagcttctggagccggtcgag
ccgggacgggtgggcatgtatgtttgcgggccgacggtttatgaccgggcgcatatcggc
aacgcccggcccgtgatcgtgttcgacgtgcttttccggctgctgcggcacgtctacggg
gcggaaaacgtgcgctatgtgcgcaactttaccgatgtggatgacaagattatcgcgcgg
gccgaggaatctggccgcgagatcgggcagatcaccgaggagacgagtcggtggtatctg
gaggatatggccgccgtcggggcgctggagcccaccgatatgccgagggcgaccgattgg
attggcgcgatggtggcgatgatcgaggggctggttgaggcgggccatgcctacgccgct
gaggggcatgtgctgtttcgcgtgcgttcttacgaggcttacggggcgctgtcgggccgc
tcggtggatgacatgatcgccggggcgcgggtggaagttgcgccctataaggaagacccg
atggactttgtgctctggaagcctgcgaaggcgggggagccggggtgggagtcgccttgg
ggcaaggggcggcccggttggcacatcgaatgctctgcgatggcggatgcgctgctgggg
gcgagctttgacattcacggcggcgggaacgacctgatgtttccgcaccatgagaacgag
attgcgcagagcaaatgcgcccaccccgagggggaatttgcccggatctggatgcacaac
gagatgcttcaggtcgagggcaagaagatgtccaagagcttggggaatttctttaccgtc
agggacttgttggatcagggcgtgccgggggaggtgatccggtttgtgtttctgggcacg
cattatcgcaagccgatggattggacggagaagaagcggcaggaggcggaggcgacgctg
cgtgattggcgcgggttggtggccggtgcggaggaaacgggcccggacacggcagtcgct
gaggcgctggcggacgatctgaataccgcgggtgccatcacccgactacacgccatggcc
aaggagatcgcagccaatccgcagaaggattgcttctatgagaagggcacgttccttgca
tccgcccgcctgatggggatcctgactgaggagctcgcaggctggaacgctgcgccgggg
gttgacctgtctgcctatgccgagcgccttggggctttgcgggaggcggcgatggagaac
aaggacttctccgccgttgatacgctgaaagcggcgttgatcgaagccggggtggaggtg
aagatgagcaggcttggcgtggatctgatagtgaaaccggagtttgacgcgagcaagctg
gaggggttgctatga
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