Oceanicola sp. D3: FHY55_12270
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Entry
FHY55_12270 CDS
T06139
Name
(GenBank) tyrosine--tRNA ligase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
ocd
Oceanicola sp. D3
Pathway
ocd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FHY55_12270
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ocd01007
]
FHY55_12270
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocd03016
]
FHY55_12270
03029 Mitochondrial biogenesis [BR:
ocd03029
]
FHY55_12270
Enzymes [BR:
ocd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
FHY55_12270
Amino acid related enzymes [BR:
ocd01007
]
Aminoacyl-tRNA synthetase
Class I (A)
FHY55_12270
Transfer RNA biogenesis [BR:
ocd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FHY55_12270
Prokaryotic type
FHY55_12270
Mitochondrial biogenesis [BR:
ocd03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
FHY55_12270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
TyrRSs_C
SYY_C-terminal
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QDC09969
LinkDB
All DBs
Position
2420415..2421665
Genome browser
AA seq
416 aa
AA seq
DB search
MTYHPKSDFMAVMIERGFLADCTDYQGLDEALIKGVVPGYIGFDATAKSLHVGSLIQIMM
LRWLQKTGHQPITLMGGGTTKVGDPSFRADERPLLTPEQIDDNIAGIKQVFAKYLDYEAE
TPALMLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFDSVKSRLDREQSLSFLEFNYMILQ
AYDFLELNRRYGCLVQFGGSDQWGNIVNGIDLTRRVIDQQIFGLTSPLLTTSDGKKMGKS
ADGAIWLNAEMCAPYEFWQFWRNTTDADVGRFLKLYTELPIDECERLGALEGSEINDAKI
RLANEVTTLCHGAEAAAAAEATAREVFEKGGVGDDLPTLTLTAADVAEGISVVQLITRAG
LAKSGKEAKRLIADNGARIDDAPLTDAGLMLDAAALSAPVKLSAGKKRHALVVLEG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgacctaccaccccaaatcggacttcatggccgtaatgatagagcgaggcttcctggcg
gattgcaccgactatcaaggccttgacgaagcactgatcaaaggcgtggtcccgggctat
atcggctttgatgccacggccaaatcgctccacgtcggctcgctcatccagatcatgatg
ctgcgctggctgcaaaaaaccggccaccagccgatcaccctgatgggcggcggcaccacc
aaggtgggagacccgtctttccgcgccgacgagcgcccgctgctgacgcccgagcagatt
gatgacaacatcgccggcatcaagcaggtgtttgcaaaatacctcgactacgaggccgaa
accccggccctgatgctcaacaatgccgaatggctcgatgggctcaactacctggaattc
ctgcgagatatcggccgccacttctcggtcaaccggatgctctccttcgatagcgtcaaa
tcccgtctcgaccgcgagcagtcgctcagcttcctcgaattcaactacatgatcctgcaa
gcctacgacttcctcgagctcaaccgccgctacggttgcctcgtccagttcggcggctcc
gatcaatggggcaacatcgtcaacggcatcgacctcacccgccgggtgatcgaccagcag
atcttcggcctcacctcgcccctgctgaccacctcggacggcaagaagatgggcaaatcg
gccgatggcgccatctggctcaacgccgaaatgtgcgcgccctacgagttctggcagttc
tggcgcaacacaaccgatgccgacgtcggccgcttcctcaagctctacacggagctgccc
attgacgaatgcgaaaggctcggtgcgctagaaggctccgagatcaacgacgccaagatc
cggctcgcaaatgaggtcacaaccctctgccacggcgccgaggctgcggcagcggcagag
gcgacggcgcgtgaggttttcgaaaagggcggcgtgggcgatgatctgcccaccctcacc
ctcacggcggcggatgtggccgaaggtatctcggtggtgcagctgatcacccgcgccggg
ttggcaaaatcgggcaaggaagccaagcgcctgatcgccgacaatggcgctcggatcgac
gatgcaccgctcaccgacgcgggcctgatgcttgacgccgccgcgctgtctgcaccggtc
aagctctccgccggcaagaagcgtcacgccctcgtcgtgctggaggggtaa
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