Oceanicola sp. D3: FHY55_12855
Help
Entry
FHY55_12855 CDS
T06139
Name
(GenBank) TRAP transporter large permease
KO
K11690
TRAP-type transport system large permease protein
Organism
ocd
Oceanicola sp. D3
Pathway
ocd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FHY55_12855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocd02000
]
FHY55_12855
Transporters [BR:
ocd02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FHY55_12855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
CitMHS
DUF3649
Na_H_antiporter
Motif
Other DBs
NCBI-ProteinID:
QDC10082
LinkDB
All DBs
Position
2537038..2538330
Genome browser
AA seq
430 aa
AA seq
DB search
MIAIYGFFALFVLLFFGLPLAFSLSVVGFVGFAMLTSIQPAGAVSAQILWDTLSSYSLSV
LPLFVLMGNLVNHAGLSRDLYRASNAVVGRFKGGLAMATVFACGGFAAVSGSSLATAATM
SSIALPSMKKYGYSPALSTGSVAAGGTLGILIPPSVIMVIYGTMTQTGVGQLFIAGVLPG
LLGILLYALAVRAVVWRKPAAGPAGEALPFGQTLREIGRVWQVLLLFALVIGGIYLGVFT
ATEAAGVGAAGAFVIALAKRTLDAAALFRIFAETVRTSAMLMAVLVGALIFSGFINMAGA
PRMITEAIRATGLGPTGVLMLLILFYLILGCVFDSLAMILLTVPVVFPLVQEMGYDPIWF
GILLVVVVEISLITPPIGMNIFIIRSVNPEIPTTTIFKGVLPFVAADVVRLALILLFPAI
VLFLPEQMAN
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcaatctacggcttcttcgccctcttcgtcctgctgttcttcggcctgccgctg
gccttttcgctcagcgtggtcggcttcgtcggcttcgccatgctcacctcgatccagccg
gcgggggcggtctcggcccagatcctttgggatacgctcagttcctactcgctctcggtg
ctgccgctcttcgtgctgatgggcaacctggtcaatcatgccgggctgtcgcgcgacctc
taccgcgcctccaacgccgtggtcgggcggttcaagggcgggctggcaatggccaccgtc
ttcgcctgcggcgggtttgccgccgtatcgggctccagccttgcgacagcggccaccatg
tcctccatcgcgctcccctcgatgaagaaatacggctactcccctgccctctccaccggc
tccgtggcagcgggcggcacccttggcattctcattccgccctctgtgatcatggtgatc
tacggcacgatgacacaaacgggcgtgggccagctcttcatcgcaggcgtgctgcccggc
ctcctcggcatcctgctctacgcactggcggtgcgcgcggtggtctggcgcaagcccgcc
gccggccccgcgggcgaggcgctgcccttcggccagaccctgcgtgaaatcgggcgtgtc
tggcaggtgctgcttctgttcgcgctcgtgatcggcggcatctacctcggcgtcttcacc
gccactgaggccgccggtgtcggtgcggcgggcgccttcgtgatcgcgctggccaaacgc
actttggatgctgccgcgctgttccgcatcttcgccgaaaccgttcgcacctccgccatg
ctgatggcggttctggtgggggcgttgatcttctccggcttcatcaacatggcaggcgcc
ccgcgcatgatcacggaggcgatccgcgccaccggcctcggcccgaccggcgtgctgatg
ctgctgatcctcttctaccttatccttggctgtgtgttcgacagccttgcgatgatcctg
ctgaccgtgccagtggtgtttccgctggtgcaggaaatgggctacgatccgatctggttc
ggcatcctgttggtggtcgtggtcgaaatcagcctgatcaccccgccgatcggtatgaac
atcttcatcatccgctcggtaaacccggagatccccaccacgaccatcttcaagggcgtc
ctgcccttcgtcgccgccgatgtcgtccgactcgcgctcattctgctgtttccggctatt
gtccttttcctgcccgagcaaatggctaattag
DBGET
integrated database retrieval system
