KEGG   Oceanicola sp. D3: FHY55_12985
Entry
FHY55_12985       CDS       T06139                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ocd  Oceanicola sp. D3
Brite
KEGG Orthology (KO) [BR:ocd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ocd02048]
    FHY55_12985
Enzymes [BR:ocd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     FHY55_12985
Prokaryotic defense system [BR:ocd02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   FHY55_12985
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like DEAD
Other DBs
NCBI-ProteinID: QDC10106
UniProt: A0A5B8BT86
LinkDB
Position
2560906..2563947
AA seq 1013 aa
MNHARHSEGAFETVIEATLLENGYVSQPAAELDRDRAIFPETVLEFIRATQPKEWKALEA
LHGDKTGAQILTDLTKWMDREGSLATLRHGFKCYGKTLRVAFFKAAHGLNPELEARYAAN
RVSITRQLHFSKVSEKSLDVALSINGIPIASVELKNPMTGQTVENALRQYRNDRDPREPI
FEFKRRMLVHFAADTDTVFMTTRLAGPATHFLPFNKGCEGGAGNPTDIKGRSYRTAYLWE
EVLQRDSLLDLLARFIHMQIEDKRDDEGRRVKKETMIFPRYHQLEAVRSLVDQARREAVG
HNYLVEHSAGSGKSNTIGWLTHRLASLHDHKNNRVFDSVIVITDRVVLDKQLQDTIYQFE
HKHGVVQKIDENSRQLAEALESAVPIIITTLQKFPFVSRQLAKMAEERGEPEVGVLKSRH
CAVIIDEAHSSQGGETATDLKEVLGGQGLREAAARNMAENEDEDMIELYRSMAKRGRQAN
LSFFAFTATPKHKTLKVFGRDGTPAHRYSMRQAIEEGFILDVLKHYTTYATYFRLLKASE
DDPNVERKKAARALARFLKLHPHNIAQKTEVMIEHFNAATQHKIGGRAKAMVVTGSRLEA
VRYKQSFDRYIKEKGYAIKSLVAFSGVVSDDKVEDLTYTEEGMNLGIREKELPEVFATQE
YQVLLVAEKYQTGFDQPLLHTMYVDRRLAGIQAVQTLSRLNRIHPLKEDTFVLDFVNDRD
EIREAFKTYFEGAEIGEDVDPARMYEIKSELDAEGVYVSADVESFSAVYFKPRQRQSPND
HQLMNAALDVSVARFQELQQEKPDEAELWRGKLLAFCSLYGFLSQIIPYQDTDLERLYVF
LRHLATKLPKRGAGPSYQFDDEVRLEYYRLQKISEGSISLNDGQSNRLDGPSEVGSGVLR
EEAVPLSRLIDVVNDRFGTDFNQADQLFFDQIIEAAISDNALRQAAMVNPGDKFELVFKN
LLEALFVERMDQNEEIFARFMNDISFQKVVTGWLSSEAYRKLNSSAEDQAEGK
NT seq 3042 nt   +upstreamnt  +downstreamnt
atgaaccacgctcgacattcagaaggtgccttcgagaccgtcatcgaggcgaccttgctt
gagaacggctacgtttctcagccggcggcagagcttgaccgagaccgggcgatctttccg
gagaccgtacttgaattcattcgcgccacccagccgaaggaatggaaggctctggaagcg
ctgcacggggacaagacgggagcgcagatcctcaccgacctgacgaagtggatggatagg
gagggctcgctcgccaccttgcgccatggcttcaagtgttatggcaagactctccgcgtg
gccttcttcaaggcggcgcatggactcaaccctgaacttgaggcgcgctatgccgccaac
cgcgtgagcatcactcggcagctgcacttctcgaaagtctcagagaaatcgctggatgtg
gcgctgagtatcaacggcattccaatcgcctcggttgaactcaagaatccgatgacagga
cagaccgttgagaatgccttgcgccagtaccgcaatgatcgcgacccacgtgaaccgatc
tttgagttcaagcgacgtatgctcgtccacttcgccgcagacaccgacacggtgttcatg
acaacacgattggctggtccagccacccacttcttgcccttcaacaaaggatgcgaaggc
ggcgcgggcaatccgaccgacataaagggtcgcagctatcgcactgcctatctctgggaa
gaggtccttcaaagggacagcctgctcgatttgttggcacggttcatccacatgcaaatc
gaggacaagcgcgacgacgaaggaaggagggtcaagaaggagacgatgatctttccgcgc
taccatcagctagaagcggttcggtctctggtggatcaggcgcggcgcgaagctgttggc
cacaactatctggtcgagcactcggccggcagcggcaagagcaacactataggctggctg
acgcaccggctggcgtccctgcatgaccataagaacaatcgcgtctttgacagcgtaatt
gtgatcactgatcgtgtagtgctggacaagcagcttcaagacacgatctaccaattcgaa
cacaagcacggcgtggtgcaaaagatcgatgaaaactcgcgccagctggcggaggcgctt
gaaagtgcggtcccgatcatcatcaccacattgcagaaatttcccttcgtctcgcgccag
ctcgcaaaaatggcggaggagcgaggcgagccagaggtgggcgtcctcaaatcccgccac
tgtgctgtgatcatcgatgaggcgcacagctcgcaaggcggcgagacggcgactgatctc
aaggaggttcttggcggtcaaggtcttcgcgaagcggcagcgaggaatatggccgagaac
gaagacgaggacatgatcgagctctaccgatcaatggcgaaacgcggccggcaagcgaac
ctcagcttcttcgcgtttaccgctacacccaagcacaagacgctcaaagtgtttggacga
gacggtacacctgcgcatagatactcgatgcgccaagccatcgaagagggcttcatcctc
gacgttctgaaacactacacgacctatgctacttattttcgtctcttgaaggccagtgag
gatgatccgaacgttgagcggaaaaaagctgcacgtgcacttgcacggttcctgaagctc
catccccacaacatcgcacagaagaccgaagtgatgatcgagcatttcaacgccgccacc
caacacaagattggagggcgcgctaaggccatggtggtgactggatcccgacttgaagca
gtccgctacaaacagagctttgaccgctacatcaaggagaagggctacgccatcaagtct
cttgtggccttttcaggtgtcgtttcggacgacaaggtggaggatcttacatacactgag
gaaggcatgaatctcggcatccgggaaaaggaattgccggaagtgttcgccacccaagaa
taccaggtcctactcgtcgccgagaaataccaaacgggcttcgaccaacccttgctccat
acgatgtatgtcgaccggcggcttgctgggatccaggccgttcaaactctttcgcgcctg
aatcgcatacacccgctaaaagaagacacgtttgtcctcgattttgtcaacgatcgggat
gaaatccgagaggcgttcaagacctactttgaaggggcggaaatcggtgaagacgtcgac
cctgctcgaatgtacgagatcaagagcgaacttgatgccgagggcgtctatgtgtctgca
gatgttgagagtttcagcgccgtctatttcaagccgcgccagcgccagagcccgaacgat
catcagttgatgaacgcggcgctcgatgtttctgtcgcgcgcttccaggaacttcaacaa
gagaaaccggacgaggccgagctatggcgcggcaagttgctcgctttctgcagcctctat
ggcttcctcagtcagatcattccttatcaggatacggatctcgagcgcctgtatgtattt
ctacgacacctcgcgacaaagctgccgaaacgcggcgctggaccttcctaccagttcgat
gacgaggtgcggcttgaatactatcgtcttcagaaaattagcgaaggctcaatcagcctt
aacgacggacagtctaatcggctcgatggcccttcggaggttggtagtggcgtgctgcgt
gaagaggccgttccgctgtcgcgcctgatcgacgtcgtaaatgatcgatttgggacagac
ttcaaccaggcggaccaactattcttcgatcaaataatagaggcagcgatctctgacaat
gcgcttcgccaggcagccatggtgaaccctggcgacaagtttgagctcgttttcaagaac
cttttggaggcgctatttgtcgagcggatggatcagaacgaggagatttttgcgcgattc
atgaacgatatatcgtttcaaaaagttgtgacgggttggctttcatctgaagcctatcgc
aagctcaacagctcggcagaagatcaagctgagggaaagtga

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