Oceanicola sp. D3: FHY55_13405 Help Entry FHY55_13405       CDS       T06139                                  Symbol uvrA Name (GenBank) excinuclease ABC subunit UvrA   KO K03701   excinuclease ABC subunit A Organism ocd  Oceanicola sp. D3 Pathway ocd03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:ocd00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     FHY55_13405 (uvrA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ocd03400]     FHY55_13405 (uvrA) DNA repair and recombination proteins [BR:ocd03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      FHY55_13405 (uvrA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       FHY55_13405 (uvrA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 AAA_25 BCA_ABC_TP_C DnaJ_CXXCXGXG nSTAND1 RsgA_GTPase AAA_21 Motif Other DBs NCBI-ProteinID:  QDC10183 UniProt:  A0A5B8BV08 LinkDB All DBs Position complement(2640843..2643704) Genome browser AA seq 953 aa AA seqDB search MAELKHIEVRGAREHNLKGIDVDIPRDELVVITGLSGSGKSSLAFDTVYAEGQRRYVESL SAYARQFLDMMEKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLFARAGT PYSPATGLPIEAQQVQDMVDRVMAMEEGTRAYLLAPIVRDRKGEYRKEFLELRKQGFQRV KVDGAFHELDDAPKLDKKYRHDIDVVVDRIVVKEGIETRLADSFRTALDLAQGIAILETA VKEDEEPERFTFSENFACPVSGFTIPEIEPRLFSFNAPFGACPECDGLGVELFFDERLVV PDQALKIYDGALAPWRKGKSPYFLQTIEAIAKHYEFDKNTVWKDLPAHVQQVFLYGSGEE EIKFRYDEGGRVYEISRPFEGVIPNMERRYRETDSNWIREEFERFQNNRPCGACGGYRLR EEALAVKIAGDHVGQVVQLSIREALEWIDSAPKKLSKQKNEIAKAILKEIRERLGFLNNV GLEYLTLSRSSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNGRLLTTLKN LRDQGNTVIVVEHDEEAIREADYVFDIGPGAGVHGGEVVAHGTPAEIAANPKSVTGEYLS GKREIPVPTERRKGNKKKLTVKKASGNNLKDVTVDFPLGKFVCVSGVSGGGKSTLTIETL FKTASMRLNGARQTPAPCETIKGLELLDKVIDIDQRPIGRTPRSNPATYTGAFTPIRDWF AGLPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCETCQGARYNRET LEIRFKGKSIADVLDMTVEDAQEFFKAVPSIREKMDALVRVGLGYIKVGQQATTLSGGEA QRVKLSKELAKRSTGRTLYILDEPTTGLHFEDVRKLLEVLHELVDQGNSVVVIEHNLDVI KTADHIIDIGPEGGDGGGTVVATGTPEQVAEVEASHTGRYLKEMLAAKRVAAE NT seq 2862 nt NT seq  +upstreamnt  +downstreamnt atggccgagttgaagcatatcgaagtgcggggtgcgcgagagcataacctcaaggggatc gacgtggatattccgcgcgacgagcttgtggtgattaccgggctgtctggctcgggaaaa tcgagcctcgcgtttgataccgtttatgccgaggggcagcggcggtatgttgaaagcctg agtgcctatgcccggcaattccttgatatgatggaaaaacctgatgtggatcacatcagc ggcttgagcccggcgatttcgattgagcagaagaccacctcgaagaacccgcgctcgacc gtggggacggtgacggagatttatgactatctccggctgctctttgcccgtgccggaacg ccctattccccggccaccggcctgcccatcgaggcgcagcaggtgcaggacatggtggac cgtgtcatggcgatggaggagggcacgcgggcttacctgctggcccccatcgtgcgtgac cgaaagggggaatatcgcaaggaattcctcgagttgcgcaagcagggctttcagcgggtg aaggtcgacggggcgtttcatgagcttgatgacgcgccgaagctcgacaagaaatatcgc catgacatcgacgtggtggttgaccggatcgtggtgaaggaagggatcgagacgcggctg gcggattcgttccgcacggcgctggacctggcgcagggcatcgcgattttggaaaccgcg gtgaaggaggatgaggagccggagcgctttaccttttccgagaattttgcctgccctgtc agtggcttcaccatccccgaaatcgagccgcggctgttttcgttcaacgcgcccttcggg gcctgcccggagtgtgacgggctcggggtggagctgttctttgacgagcggctggtggtg cctgaccaggcgctgaagatttatgacggggcactggcgccttggcggaagggcaagagc ccttattttcttcagacaattgaggcgattgccaagcactacgagtttgacaagaacacg gtgtggaaggatctgccggcgcatgtgcagcaggttttcctctacggatcgggcgaagaa gagatcaagtttcgctatgacgagggcgggcgggtttatgaaatttcccggcctttcgag ggggttatccccaatatggagcggcgctaccgggagaccgacagcaactggatccgcgag gagtttgagcggtttcagaacaaccggccttgcggggcctgcgggggctaccggctgagg gaagaggcgctggcggttaagatcgcgggcgaccatgtggggcaggtggttcagctctcg atccgtgaggcgctggagtggatcgactccgcgccgaagaagctgagcaagcagaagaac gagattgccaaggccattctgaaggaaatccgtgagcggctcggattcctgaataacgtc ggtttggagtatcttacgctgtcacgttcaagtggcacattaagtggcggcgagagccag cggatccggctggcctcgcagatcggctctggcctcacaggcgtgctctatgtgctcgac gagccctccatcggcttgcaccagcgcgacaacgggcggctgctgacgacgctgaagaac ctgcgcgaccaaggcaacaccgtgatcgtggtggagcatgacgaagaggcgatccgcgag gcggattatgtcttcgatatcggcccgggggcgggcgtgcatggtggcgaggtcgtggcg catggcactcctgcggagattgcggcgaatccgaagtctgttaccggggagtatctcagc ggaaagcgagaaattcctgtgcccaccgaacgcaggaagggcaacaagaagaaactgacg gtgaagaaggccagcggcaacaacctgaaggatgtgaccgttgatttcccgcttgggaaa ttcgtttgtgtttcgggggttagcgggggtggtaaatccacgctgacgattgagacgctg ttcaagacggcttcgatgcggctgaacggcgcgcggcagacgcctgcgccctgcgaaacg atcaaggggctggaactgctggataaggtgattgatatcgaccagcggcccatcgggcgg actccgcgttcaaacccagcgacttacaccggggccttcaccccgatccgtgattggttt gccgggctgcccgaagcgaaggcgcggggatacaagccggggcgcttttctttcaacgtg aaaggggggcggtgcgaggcgtgtcagggggatggggtcatcaagatcgagatgcacttt ttgcccgatgtctacgtgacctgcgagacctgtcagggtgcccgctacaaccgggagacg ctggaaattcggtttaaaggcaagagcatagcggatgttcttgatatgaccgtcgaagac gcgcaggagtttttcaaggcggtgccgagcatccgtgagaagatggatgcgctggtgcgg gtgggcttgggctacatcaaggtggggcagcaggcgacgacgctctctggcggtgaggcg caacgggtgaagctgagcaaggagctcgccaagcggagcaccgggcggacgctgtatatc cttgatgagccgacgaccggcttgcactttgaggatgtgcgcaagctgttggaagtgctg catgaattggtggatcagggcaactcggtggtggtgatcgagcacaacctcgatgtcatc aagaccgccgaccacatcattgatatcggccccgagggcggcgatggcgggggcaccgtg gtggccacgggcacgccggaacaggtggccgaggtggaggccagccacaccgggcgatac cttaaggaaatgcttgcggcgaagcgggtggcggcggaatga

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