Oceanicola sp. D3: FHY55_16555
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Entry
FHY55_16555 CDS
T06139
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ocd
Oceanicola sp. D3
Pathway
ocd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FHY55_16555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocd02000
]
FHY55_16555
Transporters [BR:
ocd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FHY55_16555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QDC10740
UniProt:
A0A5B8BVV2
LinkDB
All DBs
Position
complement(3324206..3325804)
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AA seq
532 aa
AA seq
DB search
MTHRKLLRTTAIVAALMGGVAAPALAETPPNMLVIANRIDDIKTFDPQESFEFAGADVSR
NVYQKLVNFDPMDLDAGYQPDIAESWEVAEDGKSITFTIAEGNTFASGNPVTAEDVIFSL
QRAVKLDKTPSFILTQFGFTPDNVEEMITADGNKVTIKLDKEYAVSFVLNCLTATIGGIV
DKETVMANEVDGDMGNEWLRTNTAGSGPYKVVDWKPSESVLMDLNPNYGGEKPAMERVIV
QHIQESATQRLQLERGDIDVARNLSPEDIAGLEGVEGVKVVDELRGRLMYFSANQKNEML
SDPKVLEALKLATDYEGMANSFLKGQYTVHQAFLPLTFLGALEDKPFSYDMDAAKAALAE
SGFPDCGPIKISVREAQERLDIAQSLQNTWGQLGCDIELIVGTGAQTLDRYRAREHDIYL
GAWGPDYPDPNTNAGTFAYNPDNSDEAGATGLLAWRNAWDAGDMSDATLAAVQENDTDKR
REMYLEIQKEHQQVSPFGVMFQQIEQNGMGASVENFVAGGATTAVSYWVITK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacacatcgcaaattgctgcgaaccacggccattgtggccgctctgatgggcggcgtg
gctgcccccgcgctggccgagaccccgcccaacatgctggtgatcgccaaccgcatcgac
gacatcaaaaccttcgacccgcaggagagcttcgagttcgccggggccgacgtgtcgcgc
aacgtctaccagaagcttgtcaacttcgacccgatggacctcgacgcaggctaccagccc
gacatcgccgagagctgggaagtggccgaggacggaaagtcgatcaccttcaccatcgcc
gagggcaacacctttgcctccggcaacccggtgacggcggaagacgtgatcttctcgctc
cagcgcgcggtgaagctcgacaagaccccgagcttcatcctcacccagttcggcttcacg
ccggacaacgtggaagagatgatcaccgccgatggcaacaaggtgaccatcaagctcgac
aaggaatacgcggtttccttcgtgctcaactgcctgaccgccaccatcggcggcatcgtc
gacaaagagaccgtcatggccaatgaggtcgatggcgacatgggcaacgagtggctgcgc
accaacaccgcaggctccggcccctacaaggtggtggactggaagccctccgaaagcgtg
ctgatggacctcaaccccaactacggcggcgagaagccggcgatggagcgggtgatcgtg
cagcacattcaggaaagcgccacccagcgccttcagctggagcgtggcgacatcgacgtg
gcccgcaaccttagccccgaagacatcgccgggctggagggcgtcgagggtgtgaaggtc
gtcgacgagctgcgcggccgcctgatgtacttctcggccaaccagaaaaacgagatgctc
tcggacccgaaggtgctggaagccctcaagctggcgaccgactacgagggcatggcgaac
agcttcctcaagggccagtacaccgtgcatcaggccttcctgccgctgaccttcctcggc
gcgctggaagacaagcccttctcctacgacatggacgccgccaaggccgcgctggccgag
tcgggctttcccgattgcgggccgatcaagatctcggtgcgtgaagcgcaggagcgtctc
gacatcgcgcaatcgctccagaacacctggggccagcttggctgcgacatcgagctgatc
gtcggcaccggcgcccaaacgctggaccgctatcgcgcccgtgagcacgatatctacctc
ggcgcatggggcccggattatcccgaccccaacaccaacgccggcaccttcgcctacaac
cccgacaactccgacgaggcaggggccaccggccttctggcgtggcggaacgcatgggat
gcaggcgacatgagcgacgccacgctggctgccgttcaggagaacgacaccgacaagcgc
cgcgagatgtatctggagatccagaaggagcaccagcaggtgtcgcccttcggcgtgatg
ttccagcagatcgagcagaacggcatgggtgcctcggttgaaaacttcgttgccggtggc
gcgaccacggctgtctcttactgggttatcacgaagtaa
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