Oceanicola sp. D3: FHY55_17840
Help
Entry
FHY55_17840 CDS
T06139
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ocd
Oceanicola sp. D3
Pathway
ocd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FHY55_17840 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocd03400
]
FHY55_17840 (ruvB)
Enzymes [BR:
ocd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FHY55_17840 (ruvB)
DNA repair and recombination proteins [BR:
ocd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FHY55_17840 (ruvB)
RecFOR pathway proteins
FHY55_17840 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_22
Rad17
AAA_3
AAA_14
TsaE
AAA_33
AAA_16
RNA_helicase
AAA_17
nSTAND3
AAA_18
Parvo_NS1
AAA_28
NB-ARC
AAA_24
NACHT
ABC_tran
Cytidylate_kin
NPHP3_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QDC10980
UniProt:
A0A5B8BWI5
LinkDB
All DBs
Position
complement(3562307..3563329)
Genome browser
AA seq
340 aa
AA seq
DB search
MAEPDPTLRPEPREEDAASGALRPESLDDFTGQAEARANLKVFIESAKRRGQAMDHTLFH
GPPGLGKTTLAQIMAKELGVGFRMTSGPVLARAGDLAAILTNLEPRDVLFIDEIHRMNPV
VEEVLYPAMEDFALDLVIGEGPAARSVRIELEPFTLVGATTRLGLLQTPLRDRFGIPTRL
NFYTVDELHSITMRGARMLKIACEEDGAREIAARSRGTPRIAGRLLRRVVDFALVEGDGR
ITKAIADGALTRLGVDKLGLDGADRRYLSLIAEAYQGGPVGVETLSAALSESRDAIEEVI
EPYLLQQGLIQRTPRGRMLAQRAWSHLGLAAPRGPGDLFE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaccggacccaaccctgcgccccgagccgcgcgaagaggatgccgcatcgggt
gcgctgcggcccgagagccttgatgacttcaccgggcaggcggaggcgcgggcaaacctc
aaggtgttcatcgaaagcgccaagcggcgtgggcaggcgatggatcacacgctgtttcac
gggccccccggcctcggcaagacgacgctggcgcagatcatggcaaaggagttgggcgtc
ggctttcggatgacctccgggccggtgctggcgcgggcgggcgaccttgcggcgatcctc
accaaccttgagccgcgcgatgtgctcttcatcgacgagatccaccggatgaacccggtg
gtggaagaggtgctctacccggcgatggaagatttcgcgctcgatctcgtcatcggcgag
gggcctgcggcgcgctcggtgcggatcgagctggagcccttcacgctggtgggggcgacg
acccggctggggctgctgcaaacgccgctgcgcgaccgcttcggcattccgacgcggctg
aacttttacaccgtggacgagctgcacagcatcaccatgcgcggggcgcggatgctgaag
atcgcctgcgaggaggacggcgcacgcgagattgcggcccgctcacggggcacgccgcgc
attgccgggcggctgctgcggcgggtggtggattttgcgctggtcgagggtgacgggcgg
atcaccaaggcgattgccgatggcgcgctgacccggctgggggtggacaagctggggctg
gacggggccgatcggcgctacctgagcctcattgcagaggcctatcagggcgggccggtg
ggggtggaaacgctctctgccgcgctctccgagagccgggacgcgattgaggaggtgatc
gagccctacctgctgcaacaggggcttatccagcgcaccccgcgcgggcgaatgctggcg
cagcgggcgtggagccacctcggcctcgccgcgccgcgcgggccgggtgacctgtttgag
taa
DBGET
integrated database retrieval system
