Oceanicola sp. D3: FHY55_17845
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Entry
FHY55_17845 CDS
T06139
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
ocd
Oceanicola sp. D3
Pathway
ocd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FHY55_17845 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocd03400
]
FHY55_17845 (ruvA)
DNA repair and recombination proteins [BR:
ocd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FHY55_17845 (ruvA)
RecFOR pathway proteins
FHY55_17845 (ruvA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
RuvA_C
HHH_5
UBA_7
HHH
Motif
Other DBs
NCBI-ProteinID:
QDC10981
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Position
complement(3563331..3563999)
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AA seq
222 aa
AA seq
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MIGRIAGRLDYRASDHVLIDVRGVGYLVYVSERTLAALPGPGEAVALYTDLLVREDNLQL
FGFPTLLEKEWHRLLTSVQGVGAKVSLAILGTLGPEGVGRAITLGDAAAVKSAPGVGPKL
AARVVNELKEKAAGVMAMGSFGGGALLPETVEVVEADAPIATPAAASAPVASGRAEAQAD
ALSALVNLGYGQSEAAQAVAQVEGEDSGALIRAALKLLAPKG
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggcggatcgccgggcggctggattatagggcttccgatcacgtgctgatcgac
gtgcgcggcgtgggctatctggtgtacgtttccgagcggacgctggccgcgctgcccggc
cccggcgaggcggtggcgctttataccgatctgctggtgcgcgaagacaacctgcaactt
ttcggctttccgaccctgcttgaaaaggaatggcaccggctgctgacctccgtgcagggc
gttggcgcgaaggtttcgctcgcaatcctcggcacgttggggccggagggcgtgggccgg
gcgataacgctgggcgacgcggcggcggtgaaatcggcaccgggcgtggggccgaagctg
gcggcgcgggtggtgaacgagttgaaggaaaaagccgccggcgtcatggcgatgggcagc
ttcggaggcggcgcgctcttgccagagacggtggaagttgtggaggccgatgcgcctatt
gccacccccgcggccgcctcggcacccgtggcgagcggcagggcagaggcgcaggccgat
gcgctttcggcactggtcaaccttggctacgggcagagtgaggcggcacaggcggtggcg
caggtggagggcgaagactccggcgccttgatccgcgcggcgctgaagctgctggcaccg
aagggctga
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