Oceanicola sp. D3: FHY55_18535
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Entry
FHY55_18535 CDS
T06139
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ocd
Oceanicola sp. D3
Pathway
ocd00260
Glycine, serine and threonine metabolism
ocd00460
Cyanoamino acid metabolism
ocd00630
Glyoxylate and dicarboxylate metabolism
ocd00670
One carbon pool by folate
ocd00680
Methane metabolism
ocd01100
Metabolic pathways
ocd01110
Biosynthesis of secondary metabolites
ocd01120
Microbial metabolism in diverse environments
ocd01200
Carbon metabolism
ocd01230
Biosynthesis of amino acids
ocd01240
Biosynthesis of cofactors
ocd04981
Folate transport and metabolism
Module
ocd_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FHY55_18535
09102 Energy metabolism
00680 Methane metabolism
FHY55_18535
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FHY55_18535
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FHY55_18535
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FHY55_18535
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FHY55_18535
Enzymes [BR:
ocd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FHY55_18535
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QDC11107
UniProt:
A0A5B8BVN0
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All DBs
Position
3686147..3687436
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AA seq
429 aa
AA seq
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MNAPHRDSGFFTEELASRDPEIAKAITQELGRQRDEIELIASENIVSKAVLEAQGSVLTN
KYAEGYPGKRYYGGCQYVDIAETLAIDRAKELFGCDFANVQPNSGSQMNQAVFLALLQPG
DTFMGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVRQQDQLLDMEDIRAKALEHKPKLIVA
GGTAYSRVWDWAAFREIADEVGAYLMVDMAHIAGLVAGGVHPSPIPHAHVCTTTTHKSLR
GPRGGMILTNDADIAKKVNSAVFPGLQGGPLMHVIAAKAVAFGEALRPEFKNYAAQVVKN
AQAMADQLQKGGIDIVSGGTDNHLCLADLRPKGVTGKAAEAALGRAHITTNKNGVPFDPE
KPFVTSGIRLGAPAGTTRGFGEPEFRQIADWIVAVVDGLAANGEDGNGEVEEKVKAEVTA
LCARFPLYE
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccccaccgtgacagcggatttttcaccgaagagcttgccagccgcgatccc
gagatcgccaaggccatcacccaggagctcggccgccagcgcgacgagatcgagctgatc
gcctccgagaatatcgtctccaaggcggtgctcgaagcccagggctcggtgctcaccaac
aaatatgccgagggctacccgggcaagcgctactacggcggctgccagtacgtcgacatt
gccgaaacgctggcgatcgaccgcgccaaggagctcttcggctgcgacttcgccaacgtc
cagcccaactccggctcccagatgaaccaggccgtgttcctcgccctgctccagccgggc
gacaccttcatgggcctcgacctcaacagcggcggccacctcacccacggctcccccgtc
aacatgtcgggcaagtggttcaacgtggtcagctacggcgtgcgccagcaagaccagctg
ctggatatggaagacatccgcgccaaggcgctggagcataagcccaagctcatagtcgct
ggtggcaccgcctattcccgcgtctgggattgggccgccttccgcgagatcgccgatgaa
gtcggtgcctacctgatggtcgacatggcccatatcgccgggctcgtcgccgggggcgtc
cacccctcgccgatcccgcatgcccatgtctgcaccaccaccacccacaaaagcctgcgc
ggcccccgtggcggcatgatcctcaccaacgacgccgacatcgccaaaaaggtgaactcg
gcggtcttccccggccttcagggcggcccgctgatgcatgtcatcgccgccaaggccgtg
gccttcggtgaggccctgcgccccgagttcaagaactacgccgcacaagtggtgaagaac
gcgcaagcgatggccgaccagctccagaagggcgggatcgacatcgtgtcgggcggcacc
gacaaccacctctgcctcgcagacctgcgccccaagggcgtcaccggcaaggccgccgag
gccgcccttggccgcgcccatatcaccaccaacaagaatggcgtgccgttcgacccggag
aagcccttcgtcacctccggcatccgcctcggcgcgcccgccggcaccacccgcggcttt
ggtgagcccgaattccgccagatcgccgattggatcgtcgccgtggtcgacggtctcgcc
gcgaatggcgaagacggcaacggtgaggtcgaggaaaaggtgaaggccgaggtcaccgcc
ctctgcgcccgcttcccgctctacgagtga
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