Oceanimonas sp. GK1: GU3_00035
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Entry
GU3_00035 CDS
T01667
Name
(GenBank) putative ribosome maturation factor rimN
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oce03009
]
GU3_00035
03016 Transfer RNA biogenesis [BR:
oce03016
]
GU3_00035
Enzymes [BR:
oce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
GU3_00035
Ribosome biogenesis [BR:
oce03009
]
Prokaryotic type
Other maturation factors
GU3_00035
Transfer RNA biogenesis [BR:
oce03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
GU3_00035
Prokaryotic type
GU3_00035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
HEPN_SAV2148
Motif
Other DBs
NCBI-ProteinID:
AEX99763
LinkDB
All DBs
Position
complement(3925..4488)
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AA seq
187 aa
AA seq
DB search
MTQQALFTAVDQLEQGGVIGYATEAVFGIGCDPDNGEAVQRVLAIKERPVDKGLVLIAAD
VSQLLPYLDLTRLPEGRLEVILESWPGPYTWIIPARPEVPEWLKGRFDSLAVRVTDHPQA
HDLCLAFGKPLVSTSANKSGEEPARSAEELAGRLGNELDYILPGNTGGRANPSLIRDGIT
GAVLRPA
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgactcagcaagcgctttttaccgccgttgaccagcttgagcagggcggagtgattggc
tatgccaccgaggcggtgtttggcattggctgcgatcccgacaacggcgaggcggtacag
cgggtgctggcgatcaaggagcgccccgtcgacaaggggctggtgctgatcgccgccgat
gtcagccagttgctgccctatctggatctgacccggctgccggaagggcggctggaggtg
atcctggaaagctggccgggcccctatacctggattattccggcccggcccgaggtgccc
gagtggctgaaaggccgctttgactcgctggcggtgcgggtcaccgatcatccccaggcc
cacgatctctgcctggcctttggcaagccgctggtctcgaccagtgccaacaaaagcggt
gaagagccggcgcgcagcgccgaggagctggccgggcggctcgggaacgaacttgattat
atattgccgggcaacactggggggcgggccaatccctcgcttattcgagatggcattacc
ggcgccgtgctgcgcccggcctga
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