Oceanimonas sp. GK1: GU3_00665
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Entry
GU3_00665 CDS
T01667
Name
(GenBank) SMC domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oce03400
]
GU3_00665
DNA repair and recombination proteins [BR:
oce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GU3_00665
Archaeal homologous recombinant proteins
GU3_00665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
AAA_23
ABC_tran
AAA_21
MPS2
nSTAND3
cobW
NTPase_1
MobB
ABC_ATPase
AAA_15
AAA_22
TsaE
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AEX99889
UniProt:
H2FZZ1
LinkDB
All DBs
Position
complement(139250..142660)
Genome browser
AA seq
1136 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTQSPFADNGLFAITGPTGAGKTTLLDAICLALYHETPR
IGTVSATSNELMTRHTADCLAEVEFEIKGEGYRAFWSQRRARGKADGKLQGPKVELARRN
GEILTDRINDKLRLTETLTGLDFGRFTKSMMLAQGGFAAFLHAGANERAELLEELTGTDI
YARISQRVFEQTREHRQALARQEAQLQGMALLNEEDRRAIERQREQAARELAEGQRALQQ
ARDALQHRQQWDRCEQQLAQASQAHQQAQAALTEAAPEQRKLEQSEPAARLQPQWQQQQQ
QQASLAALSTQRERREAELARLTAERAQFCWRGLSFSRQHQQALQALDNELEQQLQQRAE
AMAANVAGERLGEQLAGWRASVGRLTDLQRQAGERQARRQEQQQQQEALQRQGRNLAEQL
ADATKRRQQAELQHQQQQQALAGLLGDESEPTFKARLQQLRGEQSHWSALQQGADWLAGQ
QAEQRQLQDRLATLEPAWQQGEQQLAQFREHYRLLKERVRDKTTLLEQEQLIRSLEQHRA
HLQPGEACPLCGSESHPAIERYQALDDGTARALAEARAELTELEKNGQLLSQQQAERKAA
LEQARQRLQDLTQAIDQQLGRQQSLLQRLALTAEHWPAQLAERRHRLTQLETLTEQLEAA
RQALSEAEQTRQAAITHVGELEHQTQLLAQRQAALQQQAQQLAQDEEQAAQQGEALQQTL
SRTLAEFGWACPEDWAGWLRDREQQWQHWQQQQQAVNQLKEQRQQLASGLNEAARLVRRW
QESWQSLELADGEPVTAPDPLAAAHEAETRLASLHDELQRQSALLEQERRQQTDLERGLN
EAREAWQQALAASPFADEAAFLAAHLEEDERRQLQARWQALQQAQALAADRLAQAEQARR
QLGDSAPAALDALQQGEQQHQQAVNLLQQQLGRLDERLEHDAAQRRRQQALLDEIERHRR
QLQRWDQLNSLIGSADGARYRRFAQGLTLEHLVYLANRRLARLHGRYRLARNDNAELELA
VIDTWQADVARDTQTLSGGESFLVSLALALALSDLVSSKTRIDSLFLDEGFGTLDADTLE
VALDALDALNASGKMIGIISHIEALKERVPVQIKLSKGQGLGLSRLAPEFAFNGEG
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgagcctgcggctgaaaaacctcaactccctgcagggcgagtggaaaatc
gacttcactcagtcgccctttgccgacaacggcctgtttgccatcaccgggcctaccggc
gccggcaaaaccaccctgctcgacgccatctgcctggcgctttatcacgagacgccgcga
atagggacggtgtcggccaccagcaacgagctgatgacccggcacaccgccgactgcctg
gcggaagtggagttcgagattaaaggcgagggttaccgggccttctggagtcagcgccgg
gcccggggcaaggccgacggcaagctgcagggccccaaggtggagctggccaggcggaac
ggggaaattctcaccgacagaatcaacgacaagctcaggctgacggaaaccctcaccggt
ctcgacttcggccgtttcaccaagtccatgatgctggcccagggcggctttgccgccttt
ttgcatgccggcgccaacgaacgcgccgaactgctggaagagctcaccggcaccgacatt
tacgcccgcatttcccagcgggtgtttgaacaaacccgggaacaccggcaggcgctggcc
cggcaggaagcccagttgcagggcatggccctgctgaatgaagaagaccgccgggccatt
gagcggcagcgggagcaggccgcccgcgagctggccgagggccagcgagcgctacagcaa
gcccgggacgcattgcagcaccggcagcaatgggatcggtgcgagcagcagctggcgcag
gcaagccaggcccatcaacaggcgcaggcggcgctaaccgaggccgcacccgaacagcgt
aaactggaacaaagcgagcccgcggcccggctccagccccaatggcagcagcaacagcag
cagcaggccagcctggctgccttgagcactcagcgggagcggcgtgaggccgagctggcc
cgtctgacggcagaacgcgctcagttctgctggcgagggctgtcgttcagccgtcagcat
cagcaggccttgcaggcgctggacaatgagctcgaacagcaactgcaacagcgggcggag
gccatggccgccaacgtcgccggtgaacggctgggcgagcaactggcgggctggcgtgcc
agtgtgggccggctgaccgacctgcagcgccaggcgggcgagcggcaggcccgccggcag
gagcaacaacagcagcaagaggcgttgcagcggcaaggccggaacctggcggagcagctg
gccgacgccacgaagcgacgacaacaggcggagctgcaacatcaacagcagcagcaggcg
ctggcgggcctgcttggtgacgagagcgaaccgaccttcaaggcgcggctgcagcaactg
cgcggtgaacagtcccactggagcgccctgcagcagggcgccgactggctggccggccag
caggccgagcagcgccagttgcaggaccggctcgccaccctggaaccggcctggcagcag
ggtgagcaacaactggcccagtttcgcgaacactaccgtttgctcaaggagcgggtgcgg
gacaagaccacgctgctggaacaggagcagctgatccgctccctggagcaacacagggcc
cacctgcagcccggcgaggcctgccccctttgcggcagtgagtcccacccggcaattgag
cgctatcaggcgttggacgacggcaccgccagggccctggccgaagcgcgggctgagctg
acggagctggagaaaaacggtcagctcctgagtcagcagcaggcggagcgcaaggcggcg
ctggagcaggcccggcagcggctgcaggatctgacccaggccattgaccagcagctcggc
cgtcagcagtcgctgttgcagcggcttgcgctgaccgccgagcactggccggcgcaactg
gcggaacgccgccatcggctgacgcagctggagacactgaccgagcagctggaggcggcg
cggcaagcactgagcgaggcggaacagacgcggcaggccgccatcactcacgtcggcgag
ctggaacatcagacccaactgctggctcaacgacaagcggcgttgcaacagcaggcgcag
caactggcgcaggacgaggagcaagcggctcaacagggtgaagcgctgcaacagaccctg
agccgaaccctggccgagtttggctgggcctgccccgaggactgggccggctggctacgg
gacagggaacagcagtggcagcactggcagcagcagcaacaggccgtcaaccagctgaag
gagcagcgccagcaactggcctccgggctgaatgaggcggcccgtttggtccggcgctgg
caggaaagctggcagtcgctggagctggccgatggtgagccggtgacggcgcccgatccg
ctggcggcagcacacgaggcggagactcggcttgcttcactgcatgatgaactgcaacgc
cagagcgcgctgctggagcaggagcgccggcagcagacggatctggagcgggggcttaac
gaggcccgagaagcctggcaacaggcgctggccgccagcccctttgccgacgaggccgcc
tttctcgccgcgcatctggaggaggacgagcgccggcagttgcaggcgcggtggcaggct
ctgcaacaggcgcaggcattggcggcagaccggctggctcaggccgagcaggcccggcgg
cagctgggggatagcgcgcccgcggccctcgatgcactgcaacaaggagagcagcagcac
cagcaggccgtcaacctgttgcaacagcaactgggccggctggacgagcgtctggagcac
gatgccgcccagcgccgccggcaacaggcgttactggacgaaattgagcggcaccgccgt
cagttgcagcgctgggatcagctcaacagcctgatcggctccgccgatggcgcccgttac
cgccgtttcgcccagggactgaccctggagcacctggtgtacctggccaaccgccggttg
gcacggctgcatggccgctaccggctggcccgcaacgacaatgccgagctggagctggcg
gtgatcgacacctggcaggcggacgtggcccgggatacgcaaaccctgtcggggggggag
agctttttggtcagtctggcgctggcactggcgctgtcggatctggtgagcagcaagacc
cgcatcgactcgctgtttctcgacgaagggtttggcaccctggatgccgacaccctggaa
gtggcgctggatgccctggatgcgctcaacgccagcggcaagatgatcggcatcatcagc
catatcgaggcgttgaaggagcgggtgccggtgcagatcaaactgagcaaggggcagggg
ttggggctcagccggctggcaccggaattcgcctttaacggtgaggggtaa
DBGET
integrated database retrieval system
