Oceanimonas sp. GK1: GU3_00670
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Entry
GU3_00670 CDS
T01667
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oce03400
]
GU3_00670
DNA repair and recombination proteins [BR:
oce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GU3_00670
Archaeal homologous recombinant proteins
GU3_00670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
AEX99890
UniProt:
H2FZZ2
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Position
complement(142657..143874)
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AA seq
405 aa
AA seq
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MRILHTSDWHLGQHFMGKTRLDEHTAFLDWLVEQVNRHEVDALLVAGDIFDTGTPPSYAR
ELYHNFVVAMSRTGASLVLLGGNHDSVAMLNESRELLGALNVRVIPGALAEPEQQLITLA
NRRGEPAAVLCAIPFLRPRDLLESRAGDSADDKGRALQQAIAGHYQQLFEQAQARRVELG
GELPIVATGHLTTVGASSSDSVREIYIGTLEAFPASAFPAADYIALGHIHRPQKVAGCEH
IRYSGSPLALGFDEAGQQKEVLLVELAPSGLQGVTPLPVPVFQPLARVSGSLTELERRLP
EAAAAGTPERPVWLEVTVTEDDYLSDLQPRVQALCEELAVEVLLVRRGRRERGATLMAEQ
KETLSELTPEQVFERRLAAEELAPDEATGLHGLYARVLADLKEHA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatactgcatacctccgactggcacctgggccagcattttatgggcaaaacccgc
cttgacgagcacaccgcctttcttgactggctggttgaacaggtgaaccgccatgaggtg
gacgcgctactggtggccggtgacatcttcgataccggcacgccccccagctatgcccgc
gagctctaccacaactttgtggtggccatgagccgcaccggcgccagcctggtgctgctg
ggcggcaaccacgactcggtggccatgctcaatgaatcccgggaactgctgggggcgctg
aatgtgcgggtgatccccggcgcgctggcggagccggagcagcagctgattactctggcc
aaccggcgcggcgagccggcggcggtgctctgcgccatcccctttctgcgtccgcgggat
ctgctggaaagccgggccggcgacagcgccgacgacaagggccgggccctgcagcaggcc
attgccgggcattatcaacagctgtttgagcaggcgcaggcccgccgtgttgaactgggc
ggcgagttgcccattgtggccaccggccatctcactaccgtgggggccagcagcagcgat
tcggtgcgggagatttacatcggcaccctggaagcttttcccgccagcgcctttcccgcc
gccgactacattgccctcgggcacatacaccggccccagaaggtggccggctgcgagcac
attcgctatagcggttcgccgctggcgctgggctttgatgaagccggccagcaaaaggag
gtgctgctggtggagctggcgccctcgggcctgcaaggggttacgccgttgccggtgccg
gtatttcagcccctggcgcgagtgagtggcagcctgaccgagctggaacgccggctgccc
gaggcggccgccgcgggcacgcccgaacggccggtgtggctggaagtgaccgtcacggaa
gacgactacctgagcgatctccagcccagggtacaggccctgtgtgaggagctggcggtg
gaggtgctgctggtacgccggggccggcgcgaacgcggcgcgaccctgatggccgagcag
aaggaaaccctgagcgagctcacgccggaacaggtgtttgaacggcggctggccgccgag
gagctggcgccggacgaggcaaccgggctgcatggcctctatgcccgggtattggcagat
ctgaaggagcatgcatga
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