Oceanimonas sp. GK1: GU3_01145
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Entry
GU3_01145 CDS
T01667
Name
(GenBank) ribosomal small subunit pseudouridine synthase A
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oce03009
]
GU3_01145
Enzymes [BR:
oce01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
GU3_01145
Ribosome biogenesis [BR:
oce03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GU3_01145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
DUF5818
Motif
Other DBs
NCBI-ProteinID:
AEX99985
UniProt:
H2FYM9
LinkDB
All DBs
Position
231289..231972
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AA seq
227 aa
AA seq
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MRLDKFICKSTELSRSEARRAIAAGEARVNGEPVTHEAAQVHENNLVTLAGQRLVPRPFR
YLMMHKPTGTLCSNVDGVYPSLFRWLDIDRPDELHIVGRLDADTTGLVLLTDDGRWSFTI
TRPEQHCAKVYRVGLRDPLAEQTAARFAQGLLLQGENKPTQPARVEASGPREALLTITEG
RFHQVKRMFAAVGNRVVSLHREQIGGIRLNVPPGQWRPLSQAEIDGV
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcgataaattcatctgcaaaagcaccgaactgagccggtccgaggcccggcgg
gccattgcggccggcgaggcccgggtcaacggtgagccagtcacccatgaggcggcccag
gtgcacgaaaacaacctggtgaccctggccggccagcggctggtgccccgccccttccgt
tacctgatgatgcacaagcccaccggcaccctgtgctccaatgtggacggcgtctatccg
tcgctgtttcgctggctggatatcgaccggcccgatgagctgcacattgtcggccgcctc
gacgccgacaccaccggcctggtgctgctcaccgacgacggccgctggtcgtttactatc
acgcgccccgagcagcactgcgccaaggtataccgggtcggcctgcgggatccgctggcg
gagcagaccgccgcccgctttgcacagggcctgttgttgcagggggaaaacaagcccact
cagcccgccagggtcgaagccagcggcccccgcgaggcgctgctgaccattaccgagggc
cggtttcatcaggtcaagcgcatgtttgcggcggtgggcaaccgggttgtcagcctgcat
cgagagcagattggcggcattcggctgaatgtgcccccggggcagtggcgccccctgagc
caggccgagattgacggcgtctga
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