Oceanimonas sp. GK1: GU3_01400
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Entry
GU3_01400 CDS
T01667
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oce03021
]
GU3_01400
Transcription machinery [BR:
oce03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GU3_01400
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
SWC7
Motif
Other DBs
NCBI-ProteinID:
AEY00037
UniProt:
H2FYP5
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Position
complement(282140..282997)
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AA seq
285 aa
AA seq
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MTTDFQRHFALVPQGSLEAYIQAVNTIPVLSAEEEKSLAERLQNDGDLAAARQLVMSHLR
FVVHIAKSYAGYGLPQADLIQEGNIGLMKAVKRFDPTVGVRLVSFAVHWIKAEIHEYVLR
NWRVVKVATTKAQRKLFFNLRKSKKRLGWFNQQEVNRVAEDLGVLPAEVLEMESRMSAQD
QAFDLTSDDDERDGSFAPVHYLEDKSSDVAHQVEEANWEHTANRRLRAALNTLDERSQRI
IQARWLEEDDKTTLQSLADEYGVSAERIRQLEKTALKKLKAAMEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagattttcagcgccattttgccctggttccccagggcagcctggaggcctat
atccaggcagtgaacaccattcccgtgctcagcgcggaggaagaaaagtccctggccgag
cgcctgcagaatgacggcgatctggccgcggcgcgccagctggtcatgtcacacctgcgc
tttgtggtgcacattgccaaaagctatgccggttacggcctgccccaggcggatctgatc
caggaaggcaacatcggcctgatgaaggcggtcaagcgtttcgatcccaccgtgggcgtg
cgcctggtgtcttttgcggtgcactggatcaaggccgaaattcacgaatacgtgttgcgc
aactggcgggtggtcaaggtggccaccaccaaggcccagcgcaagctgttctttaatctg
cgcaagtccaagaagcgcctgggctggttcaaccagcaggaagtgaaccgggtcgccgag
gatttgggcgtgctgcctgccgaagtgctggagatggagtcgcgcatgagcgcccaggat
caggcctttgatctgacctccgacgacgacgagcgcgacggcagctttgctccggtgcac
tacctggaagacaaaagctccgacgtggcccaccaggtggaagaagccaactgggagcac
actgccaaccgtcgcctgagggccgctctcaataccctggacgagcgcagccagcgcatt
attcaggcccgctggctggaagaagacgacaagaccaccctgcagagcctggccgacgaa
tacggcgtgtctgccgagcgtattcgccagctggagaaaaccgcactgaaaaaactcaag
gccgccatggaggcataa
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