Oceanimonas sp. GK1: GU3_01845
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Entry
GU3_01845 CDS
T01667
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
oce
Oceanimonas sp. GK1
Pathway
oce00071
Fatty acid degradation
oce00280
Valine, leucine and isoleucine degradation
oce00310
Lysine degradation
oce00362
Benzoate degradation
oce00380
Tryptophan metabolism
oce00410
beta-Alanine metabolism
oce00640
Propanoate metabolism
oce00650
Butanoate metabolism
oce00907
Pinene, camphor and geraniol degradation
oce00930
Caprolactam degradation
oce01100
Metabolic pathways
oce01110
Biosynthesis of secondary metabolites
oce01120
Microbial metabolism in diverse environments
oce01200
Carbon metabolism
oce01212
Fatty acid metabolism
Module
oce_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
GU3_01845 (fadB)
00650 Butanoate metabolism
GU3_01845 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
GU3_01845 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
GU3_01845 (fadB)
00310 Lysine degradation
GU3_01845 (fadB)
00380 Tryptophan metabolism
GU3_01845 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
GU3_01845 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
GU3_01845 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
GU3_01845 (fadB)
00930 Caprolactam degradation
GU3_01845 (fadB)
Enzymes [BR:
oce01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
GU3_01845 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
GU3_01845 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
GU3_01845 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
GU3_01845 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AEY00126
UniProt:
H2FYW1
LinkDB
All DBs
Position
378451..380589
Genome browser
AA seq
712 aa
AA seq
DB search
MIYQGETLSVTLMDNGIAELCFDAPGSVNKLDSRTLLSLEAAITALEQTAGLNGLMLTSA
KDAFIVGADITEFLDKFDLPDAELAGWLSRANTLFSRIEDLPFPTLSLVRGHALGGGCEC
ILATDFRLGDASTRIGLPETRLGIMPGFGGTVRLPRLVGADNAMEWITTGQEHKADDGLK
LGLLDAVVSTDKLRHAGIQLLLHADEHDWQGRRRQKAAPLTLNPVEATMSFTTAKGMVAA
KAGPHYPAPMMAVKTIEAAAGMSREDALKVEQENFITLTRTPAARALVGIFLNEQVVKGK
AKQAVGSALPVKRLAVLGAGIMGGGIACQAAVKGMAAVMKDINNDALALGMKEAGKRLNQ
QLERGKIDGSRLAEVLAGIRPTLSYDELASVDLVVEAVVENPAIKAQVLAEAEQQVNEDT
VIASNTSTIPISTLAKSLKRPDRFCGMHFFNPVHRMPLVEVIRGEHTSDDTLNRVMACAA
AMGKTPIVVNDCPGFFVNRVLFPYFFGFNQLLADGADVSKVDGVMERRFGWPMGPAWLLD
VVGIDTAHHAATVMADGFPERMSQGGNTAIDLLFEQQRLGQKNGHGFYTWQPDKKGRLQK
TVNEASQALLREYYGPPRAFEAGIIIERMMVPMINEVVRCLEEGIIGSPAEADMALIYGL
GFPPFRGGVFRYLDTIGLNDYLAMADRHAGLGPLYRASDRLRHMAQQGETFY
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaggcgaaaccctttcggtcacccttatggataacggcatcgccgagctg
tgctttgatgcgcccggcagcgtcaacaagctggacagccgcacgctgttatcactggaa
gccgccataacggcactggagcagacggcgggcctcaacgggctgatgctcaccagcgcc
aaagacgcctttatcgtgggcgccgacatcaccgagtttctcgacaagttcgacctgccc
gacgccgagctggctggctggctgagccgtgccaacacccttttcagccgcatcgaggac
ttgccctttcctaccctcagcctggtgcgcggccatgcccttggggggggctgtgagtgc
atactggctaccgattttcgcctgggcgatgccagtacccgcattggcctgccggaaacc
aggctgggcatcatgcccggctttggcggcaccgtgcgcctgccccggctggtgggtgcc
gacaacgccatggagtggatcaccaccggccaggagcacaaggccgacgacggcctgaaa
ctggggctgctggatgcggtagtgagcaccgacaaattacggcacgcaggcatacaactg
ctgttgcacgccgatgagcacgactggcagggccgccgccggcaaaaggccgccccgctg
accctgaatccggtagaggccaccatgagctttaccaccgccaagggcatggtcgcggcc
aaggccggcccccactacccggcccccatgatggcggtaaagaccatcgaagccgccgct
ggcatgagccgggaagatgccctgaaggtggagcaggagaacttcatcacactgacccgc
acgccggcagcccgggcactggtgggcattttcctcaatgaacaggtggtcaagggcaag
gccaaacaggccgtcggcagcgccctgccggtcaagcggctggcggtgctgggcgccggc
atcatgggcggcggtatcgcctgccaggcggcggtcaagggcatggcggcggtaatgaag
gacatcaataacgacgccctggccctgggcatgaaggaggccggcaagcggctgaaccag
cagctggagcggggcaaaattgacggctcccgtctggccgaagtgcttgccggcattcgc
cccaccttgagctacgatgagctggccagcgtcgatctggtggtggaggccgtggtggaa
aaccccgccatcaaggcgcaagtgctggccgaggcggaacaacaggtgaacgaagacacc
gtcattgcctccaatacctccaccattcccatctcaaccctggcaaaaagcctgaaacgc
cccgaccggttctgcggcatgcactttttcaacccggtgcaccgcatgcccttggtggaa
gtgattcgcggcgagcacaccagtgacgacaccctcaaccgggtgatggcctgcgctgct
gccatgggcaaaacccctatcgtggtcaacgactgccccggcttttttgtcaaccgggtg
ctgttcccctacttttttggctttaaccagctgcttgccgatggtgccgatgtcagtaag
gtggacggtgtcatggaacgccgcttcggctggcccatgggaccggcctggctgctggat
gtggtgggcatcgacaccgcccatcatgccgccaccgtcatggccgacggctttcccgaa
cgcatgagccagggcggcaacactgccattgatctgctgtttgagcagcaacggctgggg
cagaaaaacggccacggcttttacacctggcagccggacaaaaaaggccgactgcaaaaa
accgtgaatgaagccagccaggccctgttgcgagaatactacggcccgccccgtgccttt
gaagccggtatcattatcgaacgcatgatggtgcccatgatcaacgaggtggtacgctgc
ctggaagaaggcattatcggctctcccgccgaggcagacatggccctgatctacggcctg
ggttttccgccctttcgtggcggcgtgttccgttacctcgacaccatcggcctgaacgat
tatctggccatggcggatcgccacgccgggctggggccgctttaccgggccagcgaccgg
ctgcgtcacatggcgcaacagggtgagaccttttactga
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