Oceanimonas sp. GK1: GU3_02505
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Entry
GU3_02505 CDS
T01667
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
oce
Oceanimonas sp. GK1
Pathway
oce03030
DNA replication
oce03410
Base excision repair
oce03420
Nucleotide excision repair
oce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GU3_02505
03410 Base excision repair
GU3_02505
03420 Nucleotide excision repair
GU3_02505
03440 Homologous recombination
GU3_02505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oce03032
]
GU3_02505
03400 DNA repair and recombination proteins [BR:
oce03400
]
GU3_02505
Enzymes [BR:
oce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GU3_02505
DNA replication proteins [BR:
oce03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GU3_02505
DNA repair and recombination proteins [BR:
oce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GU3_02505
NER (nucleotide excision repair)
GGR (global genome repair) factors
GU3_02505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AEY00258
UniProt:
H2G117
LinkDB
All DBs
Position
531148..533883
Genome browser
AA seq
911 aa
AA seq
DB search
MVAIPAKPLILVDGSSYLYRAYFASQQADLRTSDGRPTGAIRVVTNMLRSLHKQFPESRV
AVVFDAKGKTFRDDIYPEYKAHRPSMPDDLRSQIQPIHDIIRAMGLPLLIEEGVEADDVI
GTLARQATEQRLDVVISTGDKDMAQLVSDHVLLMDTMKNSFLDRDGVVEKFGVPPESIID
LLALVGDKVDNIPGMPGVGEKTALALLQGLGSIDDIAANTDKIASLGFRGAKSFAPKFVE
HEEMVRLSYTLATIKTDVALHVGPADLQQTAPDTEALRALYQEFEFRNLLAELESDSAGE
AVPAAPALETDYQTVTGQAELDEWIARLKAAPYFAFDTETTSLSYRDARVVGVSFAVEAG
QAAYVPFGHDYLDAPEQLSEAQVLGALKPLLEDESRIKLGQNLKYDINVLKNHGIALKGA
LLDTMLESYVLNSVQTRHDMDSMAAFFLNHSTTSFESIAGKGAKQLTFNQIPLEQAGPYA
AEDADITLRLHHHLSEKLAAEPVLESVFNDIEMPLVPILAQMEYTGVRIDSQLLAMQSEE
IAKRLKELEREAFELAGEPFNLSSTKQLGEILFTKLALPVIKKTPKGAPSTAEEVLQELA
LDYPLPKLLMEYRGLSKLKSTYTDKLPLMVNEHSGRIHTSYHQANTATGRLSSSDPNLQN
IPIRTPEGRRIRQAFVAEPGYKLVAADYSQIELRIMAHLSQDQGLLDAFAHGQDIHKATA
AEVFGVAVEQVSAEQRRRAKAINFGLIYGMSAFGLARQLGIGRNEAQDYMNIYFERYPGV
LRYMETTREQASEQGYVSTLFGRRLYLPEIKSKNGARRKGAERAAINAPMQGTAADIIKQ
AMIRVNDWLGELPEGEVRMLMQVHDELVFEIREDKVDAHRETICALMQQAASLDVPLLVE
AGVGDNWDQAH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggttgccattcctgccaaacccctgatcctggttgatggatcctcctatctttatcgt
gcttattttgcgtcccagcaagccgatctgcgcaccagcgacggccggcccaccggcgcc
attcgcgtggtgaccaacatgctgcgcagcctgcacaagcagtttcccgaatccagggtg
gcggtggtgttcgatgccaagggcaaaacctttcgcgacgacatttacccggaatacaag
gcgcaccggccgtccatgccggacgatctgcgcagccagatacagcccattcacgacatc
attcgcgccatggggctgccgctgctgatcgaggaaggggtggaggcggacgacgtgatt
ggcaccctggcccggcaggccaccgagcagcggctggacgtggtgatcagcaccggcgac
aaggacatggcccagctggtgtcggatcacgtgctgctgatggacaccatgaaaaacagc
tttctcgatcgggacggcgtggtggaaaaattcggcgtgccgccggagtcgattatcgat
ctgctggcgctggtgggcgacaaggtagacaacattcccggcatgccgggggtgggcgag
aaaaccgccctggcgttgttgcaggggctgggctccatcgacgacatcgccgccaacacc
gacaagattgccagcctcggctttcgcggcgccaagtcctttgcgcccaagttcgtcgag
cacgaggagatggtgcggctgtcctacaccctggccaccatcaagaccgatgtggcgctg
catgtgggccccgcggatcttcagcagacggcgccggacaccgaggccctgcgcgccctc
tatcaggaatttgaattccgcaatctgctggcggagctggagtcggactcggccggggaa
gccgtaccggcggcaccggcgctggagaccgactatcagaccgtaaccggccaggccgag
ctggatgaatggattgcccggctcaaggcggcgccctatttcgcctttgataccgagacc
accagcctcagctaccgggatgcccgggtggtgggggtgtcgtttgcggtggaggcgggc
caggccgcctatgtgccctttggccacgattacctggatgcccccgagcagctgagcgaa
gcgcaggtgctcggggccctcaagccgttgctggaggatgaaagccgcatcaagctgggc
cagaacctcaaatacgacatcaacgtgctgaaaaaccacggtattgcgctgaagggcgcg
ctgcttgataccatgctggagtcctatgtgctcaattcggtacagacccggcacgacatg
gacagcatggcggcctttttcctcaatcacagcaccacatcctttgagtccattgccggt
aagggtgccaaacagctcacctttaaccagatccctctggagcaggcggggccctatgcg
gcggaagacgccgacattaccctgcggctgcatcaccatctgagcgaaaaactggctgcc
gagccggtgctggaaagcgtgttcaatgatattgagatgccgttggtgccgattctggcc
cagatggaatacaccggcgtgcgcatcgacagccagctgctggccatgcagagtgaggaa
atagccaagcggctgaaggagctggagcgggaggcgtttgagctggccggtgagcccttt
aacctgagctccaccaagcagctcggcgagatcctgttcaccaaactggcactgccggtg
atcaagaagacccccaagggagcgccgtccaccgccgaagaagtgctgcaggagctggcg
ctggattacccgctgcccaaactgctgatggaataccggggcctgagcaagctcaagtcc
acctacaccgacaagctgccgctgatggtgaatgagcacagcgggcgcattcatacctcc
taccaccaggctaacaccgccaccggccggctgtcgtcgtcggatcccaatctgcagaac
attcccatccgcacgccggaagggcggcgcattcgccaggcttttgtggccgagcccggc
tacaaactggtggcggcggactactcccagatcgagctgcgcatcatggcgcacctgtcc
caggatcaggggctgctggacgcctttgcccacggccaggacattcacaaggccaccgcc
gccgaggtgttcggggtggcggtggagcaggtgtctgccgagcagcgccgccgggccaag
gccatcaattttggcctgatctacggcatgagtgcctttggtctggcgcgccagctgggc
attggccgcaacgaggcccaggactacatgaacatctactttgaacgctaccccggggtg
ctgcgctacatggagaccacccgggagcaggccagtgaacagggctatgtttccaccctg
ttcggccgccggctctacctgccggaaatcaaatccaagaacggcgcccggcgcaagggt
gccgagcgggccgccatcaacgcgcccatgcagggcactgccgccgacatcatcaagcag
gccatgattcgagtgaatgactggctgggtgagctgcccgagggcgaggtacgcatgctg
atgcaggtgcacgacgaactggtgtttgaaattcgtgaagacaaggtagacgcccaccgg
gaaaccatctgcgcgctgatgcagcaggccgccagtctggatgtgcccctgctggtggaa
gccggggtgggtgacaactgggatcaggctcactaa
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