Oceanimonas sp. GK1: GU3_03810
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Entry
GU3_03810 CDS
T01667
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
oce
Oceanimonas sp. GK1
Pathway
oce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GU3_03810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oce03019
]
GU3_03810
Enzymes [BR:
oce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
GU3_03810
Messenger RNA biogenesis [BR:
oce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GU3_03810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
AEY00519
UniProt:
H2FZS2
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All DBs
Position
complement(815877..817223)
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AA seq
448 aa
AA seq
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MQPVILTRDQHGISRRQISENALKVLYRLNKAGFDAYLVGGGVRDLLLGRQPKDFDVATS
ATPEQVKGLFSNCRLVGRRFRLAHVLFGRDVIEVATFRGHHHSVNTSKQLSSRSKEGMLL
RDNVYGTIEEDAERRDFTVNALYYNIADFTVHGFAGGLKDLEARRLELIGDPETRYREDP
VRMLRAVRFSAKLGLSISPRTEAPIRELAPLLTDIPAARLFEETLKLLLAGQGVETYRQL
QHYGLFAPLFPEAAEVMGRGNNRYGRFIELALANTDERIAQDLRVTPAFLYAALLWGPVE
TRTQEFVNEGGLGYHDAFMLAADDVIGRQVKSVAIPRRFSTVVRDIWQLQDRLTKRAGKR
PFRLLEHPKFRAGYDFLLLRAELDPRLKELAEWWTEFQQANPVERHPVDRDSAERQQPSR
NARQDNDERGERKPRKRPRRRPRRRKES
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacccgtgatactgacgcgcgaccagcacggtatttcgcgccgacaaatcagtgaa
aacgccctcaaggtgctctatcgcctgaacaaggcgggctttgatgcctacctggtgggc
ggtggcgtgcgcgacctgctgctggggcgtcagcccaaggactttgacgtggccaccagc
gccacgcccgagcaggtcaaggggctgttcagcaactgccggctggtgggtcgccgcttt
cgcctggcccatgtgctgttcggccgggacgtgatcgaagtcgccacctttcgcggccat
caccacagcgtcaacaccagcaagcagctgtcttcccgctccaaggaaggcatgctgctg
cgtgacaacgtttacggcaccatagaggaagacgccgagcgtcgcgatttcaccgtcaac
gccctctactacaacattgccgacttcaccgtgcacggttttgccggcgggttgaaggat
ctggaagcccgtcgcctggagctgattggcgacccggagacccgctaccgggaggatccg
gtgcgcatgctgcgggcggtgcgtttttccgccaagctggggctgtccatcagcccgcgc
acagaggcccccattcgggaactggcgccgctgctgacggacattcccgccgcccggctg
tttgaggaaaccctcaagctgctgctggccggccagggcgtcgaaacctaccgccagttg
cagcactacggcctgtttgcaccgctgtttccggaagccgccgaagtcatgggccggggc
aacaaccgctacggtcgctttatcgagctggccctggccaacaccgacgagcgtatcgcc
caggatctgcgggtgacccccgccttcctctatgccgccctgctgtggggaccggtggaa
acccgtacccaggagttcgtcaacgaagggggccttggttatcacgatgcctttatgctg
gccgccgacgacgtgattggccgccaggtgaaaagcgtggccataccgcgccgcttcagc
actgtggtgcgggacatctggcaattgcaggaccggctgaccaagcgcgccggcaagcgc
ccgttccgcctgctggagcatcccaaattccgcgccggctacgactttctgctgctgcgg
gccgagctggatccgcgcctgaaggagctggccgaatggtggaccgagttccagcaggcc
aacccggtggagcgccacccggtggaccgcgattcggcagaacgccagcagccaagccgc
aacgcccgccaggataacgacgagcgtggcgagcgcaaaccacgcaagcgcccccgtcgc
cgaccgcgccggagaaaggagtcgtga
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