Oceanimonas sp. GK1: GU3_03830
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Entry
GU3_03830 CDS
T01667
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oce03016
]
GU3_03830
Enzymes [BR:
oce01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GU3_03830
Transfer RNA biogenesis [BR:
oce03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GU3_03830
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AEY00523
UniProt:
H2FZS6
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All DBs
Position
complement(819896..820417)
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AA seq
173 aa
AA seq
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MANDDNRLFLAFPAEQLAPALEALQHRLALPGRRIPPHQLHLTLHFLGQCSPEQQSSLLT
QLDRLPLPGIELELDRLGCFPRAGVVWLGPSQPPPALMTLAETVELKCRALGIGKPHKAY
RPHITLFRHCKTHDLPVITPVPYRPQALCLYRSTLTDQGPVYECLKRWLLKRD
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgatgacaaccggctgttcctggcctttcccgccgagcagctggccccggca
cttgaagcactgcaacaccggctggccctgcccggccggcgcattccaccgcaccagctg
cacctgaccctgcactttctcggccagtgcagcccggagcagcagtcctcactgctcaca
caactggaccgcctgcccctgcccggtattgaactggagttggaccggctgggctgcttt
ccccgggccggcgtggtgtggctggggccgagccagccgccgccggcgttaatgaccctg
gccgagacggtggagctgaaatgccgggccctgggcattggcaagcctcacaaggcctac
cgtcctcacatcaccctgtttcgccactgcaaaacccatgatctgcccgtcatcaccccg
gtcccttaccggccccaggcgttgtgtctgtaccgctccaccctcaccgaccaggggccg
gtgtatgaatgccttaagcgctggctcttgaagagggattag
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