Oceanimonas sp. GK1: GU3_04630
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Entry
GU3_04630 CDS
T01667
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oce03019
]
GU3_04630
03009 Ribosome biogenesis [BR:
oce03009
]
GU3_04630
03036 Chromosome and associated proteins [BR:
oce03036
]
GU3_04630
Enzymes [BR:
oce01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
GU3_04630
Messenger RNA biogenesis [BR:
oce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GU3_04630
Ribosome biogenesis [BR:
oce03009
]
Eukaryotic type
90S particles
RNase
GU3_04630
Prokaryotic type
rRNA processing factors
GU3_04630
Chromosome and associated proteins [BR:
oce03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
GU3_04630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
CapR
Motif
Other DBs
NCBI-ProteinID:
AEY00683
UniProt:
H2G0B0
LinkDB
All DBs
Position
1001879..1002547
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AA seq
222 aa
AA seq
DB search
MKKLNNLQKQLGHTFNDEALLVRALTHRSAGSRHNERLEFLGDSILSMVIADALFHRFPK
VNEGDMSRMRATLVREKTLAELARAFELGEYLILGPGELKSGGYRRESILADAVEALIGA
IYLDSGIERITQLLLSWYDSRLNDIQPGVEQKDPKTRLQELLQGKRKPLPTYEVVDVIGE
AHNQKFTVHCTVDGLAEPVVGVGTSRRKAEQAAAEQALDTLL
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattgaacaacctgcaaaaacaactgggtcatacctttaacgacgaagccctg
ctggtacgggcgctgactcaccgtagcgccggctcccgccataacgagcgactggagttc
cttggggactccatcctcagcatggtgatcgccgacgccctgttccatcgttttcccaag
gtcaacgaaggggacatgtcacgcatgcgcgccaccctggtgcgggaaaagaccctggcc
gagctggcccgggcctttgagctgggggaatacctgatcctggggcccggtgagctgaaa
agcggcggttaccgccgggaatcgatcctggccgatgcggtcgaggcgctgatcggcgcc
atctacctcgacagcggcatagagcgcattacccagctgctgctgagctggtacgacagc
cggctcaacgacattcagcccggggtggagcaaaaggatcccaagacccggctgcaggag
ctgttgcagggcaagcgcaaaccgctgcccacctacgaggtggtcgacgttattggcgag
gcccataatcagaaatttaccgtgcactgcaccgtggacggcctggccgagcccgtggtg
ggggtgggcaccagccgccgcaaggcggaacaggcggcggccgagcaggccctggatacc
ttgttatga
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