Oceanimonas sp. GK1: GU3_04640
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Entry
GU3_04640 CDS
T01667
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
oce
Oceanimonas sp. GK1
Pathway
oce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GU3_04640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oce03400
]
GU3_04640
DNA repair and recombination proteins [BR:
oce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GU3_04640
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GU3_04640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AEY00685
UniProt:
H2G0B2
LinkDB
All DBs
Position
1003452..1004159
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AA seq
235 aa
AA seq
DB search
MAHAAFVIHSRPYRETSQLVEVFTRERGRQSLVARGSRQPRSPLKGLLQPFVPLRLTFGG
KGELKTLYSAEATGPAIRLTGPALYSGLYLNELIYYLLEIQTPFDEVFEVYVETLHQLAG
GSTLEPCLRHFEFYMLNVLGYGVDFTQDAESGAAVCARGWYAYQPEAGFVALESRQPGAF
RGDWLHALARLELDTPEVLAAAKRFSRTALAPYLEGRVLKSRALFIKGKRGSPSE
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgccgcctttgtcattcacagccgtccctaccgggaaaccagccagctggtg
gaggtctttactcgggagcgggggcggcagagtctggtggcccggggcagccgccagccc
cgctcgcccttgaaggggctgctgcagccctttgtgcccctgcggctcacctttggcggc
aagggcgagctgaaaaccctctacagcgccgaggccaccggcccggctattcggctgacc
ggcccggccctctacagcggcctgtacctcaacgaactcatttattacctgctcgagata
caaacgccctttgacgaggtgtttgaggtctacgtggaaaccctgcaccaactggcgggc
ggcagcacgctggagccctgtctgcgtcatttcgagttttacatgctgaatgtgctcggc
tacggtgttgattttacccaggatgccgagagcggagcagccgtttgtgctcgaggctgg
tatgcttaccagcccgaagccggctttgtggcgctggagagccggcagcccggcgccttt
cgcggcgactggctccatgccctggccaggctcgagctggacacgcccgaggtgctggcg
gcggccaagcgtttcagccgtaccgcgctggcgccctatctggaggggcgggtgctgaaa
agccgggccctgtttatcaaaggaaagagaggaagtcccagtgagtga
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