Oceanimonas sp. GK1: GU3_05070
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Entry
GU3_05070 CDS
T01667
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oce03400
]
GU3_05070
DNA repair and recombination proteins [BR:
oce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GU3_05070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Lon_C
Zn_ribbon_LapB
DnaB_C
AAA
AAA_22
SLFN-g3_helicase
AAA_16
RecA
ABC_tran
Rad51
GvpD_P-loop
AAA_14
AAA_24
nSTAND3
NTPase_1
AAA_29
Zeta_toxin
DUF7125
PAXNEB
NACHT
DZR
Motif
Other DBs
NCBI-ProteinID:
AEY00771
UniProt:
H2G0G2
LinkDB
All DBs
Position
1102317..1103684
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AA seq
455 aa
AA seq
DB search
MAKSKTAFVCGECGAEFPRWQGQCSECKEWNTVSEVRLAPATSSSRNARFSGYAGLQENK
VQTLNEIAMTEIPRINSGFRELDRVLGGGLVPGSAILIGGNPGAGKSTLLLQVMCGLAGR
MKTLYVTGEESLQQVAMRAQRLGLPRDQLRMLSETSVEQICQVAREEQPAVMVIDSIQVM
HVADVQSAPGSVSQVREAAAQLTRFAKQQGVVILMVGHVTKDGTLAGPKVLEHCIDCSVL
LDGAADSRFRTLRSHKNRFGAVNELGVFAMTETGMKEVSNPSAIFLSRGEEQTTGSVVMV
IWEGTRPLLVELQALVDYSQLANPRRVTVGLEHNRLALLLAVMHRHGGMQMADQDVFVNV
VGGVRVEDTSADLALLLALVSSFRDKALPKELVVFGEVGLSGEIRPVPSGQERLMEAAKH
GFTRAIVPWANRPKQAPEGMEVIPVKKLEDALAAL
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtccaaaaccgccttcgtgtgtggggagtgcggtgccgaatttccccgctgg
caggggcagtgctccgagtgcaaggagtggaacaccgtcagcgaagtccggctggcaccg
gcaacctcgtccagccgcaatgcccgtttctccggctatgccggcctgcaggaaaacaag
gtccagaccctcaacgaaattgccatgaccgaaattccgcgcatcaacagcggctttcgc
gagcttgaccgggtgctgggcggcggtctggtgcccggctcggccattctcatcggcggc
aacccgggggcgggcaagagtaccctgctgctgcaggtgatgtgcggcctggccgggcgc
atgaaaaccctgtacgtcaccggcgaggaatcgttgcagcaggtggcgatgcgcgcccag
cgcctgggcctgccccgggatcagctgcgcatgctgtcggaaaccagcgtcgagcaaatc
tgccaggtggcccgggaggaacaaccggcggtgatggtgatcgactccattcaggtgatg
cacgtggccgatgtgcagtcggcgccgggttcggtgagccaggtgcgggaagcggcggcc
cagctgacccgctttgccaagcagcagggggtggtgatcctgatggtggggcatgtcacc
aaagacggcaccctggccggccccaaggtactggagcactgcatcgactgctcggtgctg
cttgatggcgccgccgacagccgctttcgcaccctgcgcagccacaagaaccgcttcggc
gcggtcaacgagctgggggtgttcgccatgaccgaaaccggcatgaaggaagtgagcaac
ccgtcggccatcttcctcagccggggcgaggagcagaccaccggatccgtggtgatggtg
atctgggaaggcacccggcccttgctggtggagctgcaggcgctggtggattattcccag
ctcgccaacccgcggcgggtgaccgtgggtctggagcacaaccggctggcgctgctgctg
gcggtaatgcaccgccacggcggcatgcagatggcggatcaggatgtgttcgtcaacgtg
gtgggcggcgtgcgggtggaggacaccagcgccgatctggcattgttgctggcgctggtg
tcgagctttcgcgacaaggcgctgcccaaggagctggtggtgttcggcgaggtgggcctg
tccggggagatccggccggtgccttcggggcaggagcggctgatggaagcggccaagcac
ggctttacccgggccatcgtaccctgggccaaccggcccaagcaggctcccgagggcatg
gaagtgatcccggtgaaaaaactggaagacgcgctggcggcgctgtaa
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