Oceanimonas sp. GK1: GU3_05295
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Entry
GU3_05295 CDS
T01667
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
oce
Oceanimonas sp. GK1
Pathway
oce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GU3_05295 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oce03019
]
GU3_05295 (groEL)
03110 Chaperones and folding catalysts [BR:
oce03110
]
GU3_05295 (groEL)
03029 Mitochondrial biogenesis [BR:
oce03029
]
GU3_05295 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oce04147
]
GU3_05295 (groEL)
Enzymes [BR:
oce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GU3_05295 (groEL)
Messenger RNA biogenesis [BR:
oce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GU3_05295 (groEL)
Chaperones and folding catalysts [BR:
oce03110
]
Heat shock proteins
HSP60 / Chaperonin
GU3_05295 (groEL)
Mitochondrial biogenesis [BR:
oce03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GU3_05295 (groEL)
Exosome [BR:
oce04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GU3_05295 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
GU3_05295 (groEL)
Exosomal proteins of breast cancer cells
GU3_05295 (groEL)
Exosomal proteins of colorectal cancer cells
GU3_05295 (groEL)
Exosomal proteins of bladder cancer cells
GU3_05295 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEY00816
UniProt:
H2G0H2
LinkDB
All DBs
Position
1141373..1143019
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLKGVNILADAVKVTLGPKGRNVVLDKSFGAPNITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAVVKAVEELKALSVPCKDTKAIAQVGTISANSDEKVGTLIAEAMEKVGTDGVITVEEG
QGLEDELDVVEGMQFDRGYLSPYFINKQETGTVELEDPFILLVDKKVSNIRELLPVLEGV
AKQSKPLLIVAEDVEGEALATLVVNNMRGIVKVAGVKAPGFGDRRKAMLQDIAILTGGTV
ISEEVGLELEKATLEDLGRAKRVVISKDNTTIIDGVGEAETINARVAQIRQQIEESSSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVDDALHATRAAVEEGVVPGGGVALV
RAAAKLSGLTGDNEDQNVGIKVALRAMEAPLRQIVTNAGEEASVVVSKVKASEGNHGYNA
GNDTYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPKDDAASMPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaatttggtaacgacgcccgcgttaaaatgctcaagggtgtg
aacatcctggccgacgccgttaaggtgaccctgggcccgaaaggccgcaacgtggtactg
gacaagtccttcggtgcccccaacatcaccaaggacggcgtgtccgtggccaaggaaatc
gaactggaagacaagttcgagaacatgggcgcccagatggtgaaggaagtggcttccaag
gccaacgacgaagccggtgatggcaccaccaccgccaccgtactggcccagtccattgtt
aatgaaggcctgaaggccgtggccgccggcatgaacccgatggatctgaagcgcggcatc
gacaaggccgtggtcaaggcagtggaagagctgaaagccctgtccgtaccctgtaaagac
accaaggccattgcccaggtgggtaccatctccgccaactccgatgaaaaggtcggcacc
ctgatcgccgaagccatggaaaaagtgggcaccgacggtgtgatcaccgtggaagaaggc
cagggtctggaagacgagctggacgtggtggaaggcatgcagttcgaccgcggttacctg
tctccctacttcatcaacaagcaggaaaccggcaccgttgagctggaagaccccttcatt
ctgctggtggacaagaaagtttccaacattcgtgagctgctgccggtgctggaaggcgtc
gccaagcagtccaagccgctgctgattgtggccgaagacgtggaaggcgaagccctggcc
accctggtggtgaacaacatgcgcggcatcgtgaaggtggccggcgtcaaggctcctggc
tttggtgaccgccgcaaggccatgctgcaggacatcgccatcctcaccggcggtaccgtg
atctccgaagaagtgggtctggagctggaaaaggccaccctggaagatctgggccgtgcc
aagcgcgtggtgatcagcaaagacaacaccaccatcattgatggcgtgggcgaagccgaa
accatcaacgctcgcgtggcgcaaattcgccagcagatcgaagaatcctcttctgactac
gatcgcgagaagctgcaagagcgcgtggccaagctggccggcggtgtggccgtgatcaag
gtgggtgccgccaccgaagtggaaatgaaagagaagaaggcccgcgttgacgacgccctg
cacgcaacccgtgctgcggtggaagaaggtgtggtgcccggtggcggtgtggccctggta
cgtgccgctgccaagctgtccggcctgaccggtgacaacgaagatcagaacgtgggtatc
aaggtagctctgcgcgccatggaagccccgctgcgtcagattgttaccaacgccggcgaa
gaagcctcggtagtggtatccaaggtcaaggccagcgaaggtaaccacggctacaacgcc
ggtaacgacacctacggcgacatgctggaaatgggcatcctggatccgaccaaggtgacc
cgctccgcgctgcagtttgccgcttccgtggccggtctgatgatcaccaccgaagccatg
gtaaccgacctgccgaaggacgatgccgcctccatgccggacatgggcggcatgggtggt
atgggtggcatgggagggatgatgtga
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