Oceanimonas sp. GK1: GU3_05360
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Entry
GU3_05360 CDS
T01667
Name
(GenBank) small-conductance mechanosensitive ion channel (MscS) family protein
KO
K22051
miniconductance mechanosensitive channel
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oce02000
]
GU3_05360
Transporters [BR:
oce02000
]
Other transporters
Pores ion channels [TC:
1
]
GU3_05360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
DUF6664
Bac_export_2
Motif
Other DBs
NCBI-ProteinID:
AEY00829
UniProt:
H2G0I5
LinkDB
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Position
complement(1153973..1157299)
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AA seq
1108 aa
AA seq
DB search
MFAPILLFLMLLLLPAPVPADQSVADIEALLKEIPEGDKPELQKLRDSYNQALQLVREGE
RYQQQTDRLRQFMDDYPNALKKLEQEKAALKGTSTESIPLLDGPDLEQALVDAQARRLEL
RRQREELANTFNLQELSNSGLHNQLDELRQQLRQTQQNLDQLQFTEEQGRQQNANRILAM
VREQSLQRRIQMLELEQLSSGNRDTLNKLRLEILQSRLTDLDQYIDALQNRQNELRRATT
EAAIAESERLLDEVQTDSPLLAREQERNQQLSATLVERSRTIESLQLENQAVESAVSELT
TLKNNLKEQLEWLEVSRGFGENLRNRLSELPTPYPLPQLEARIVQSRVDKYSYQEDLDDI
ANNSYRNRLLTLEQGLSEEQLLLLDELLTTRARLLERLQAATDTQIHEQTRLKVAYSRQN
GQLEEIRALTEERLFWLPDLRPVGSGFPAALRETLEWLTLGATWTALPKALQQQGGASLT
LYGISTLVVLYLWLLSRRSLRDYLTRISPRIGNVTQDKYGYTFNTLLLSLLTALPLPALL
SLLSHAIDSPLASPIVVSLSAALRELMLPVFILLLVGNLTLPKGLLVMHFNLPAEQVRRV
WRQFRTLMLSLLPMLLLLYTSREFREFSLYDTLGRLAFVYTCVLMSLFSWRLYRQDMPLL
VSSPRQEHLTLANHLLWGLLITAPLLALAAAIMGYLFTAHTLLRQLEISVLAGLGFVMAY
FSVRRWMLLQRRRLAFERAKARRAEILAQRKEKERDEPQETPPSPEAEAAAVAEVDLDAI
SAQSLGLLRSVLMLGYILTLMLLWSEINTAFSFLDSIEVWHVSSSLAGEDTLVPISLKDL
VIAVFLVVLTLVTARNLPGLMELSVLQHLDLSPGTGFAITTISKYLVLVFGAFATFAMLG
IDWSKLQWLVAALSVGLGFGLQEIFANFVSGLIILFEKPIRIGDTVTIRDLTGTISKIKT
RATTIVDWDRREIIVPNKAFITEQFVNWSLSDAITRVKLYVRVRLDADVELVQGLLQEAI
DECSLILDNPVPEAFLVELTDSALVYEVRVYVNDMGHRMPMTHELHNLLLERLRRHDIRI
PHQQVDIRLVGEHNAALAGTSNKAAEPG
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgcgcccattctgctgtttttgatgctgttgttgctgccggccccggtgccggcg
gatcagagcgtggccgatatcgaggccctgctgaaggaaattccggaaggggacaagccc
gagctgcaaaaactgcgcgacagttacaaccaggcgctgcaactggtgcgggaaggcgaa
cgctatcaacagcaaaccgaccgcctgcgccagttcatggacgactacccgaacgcgctg
aaaaagctggagcaggaaaaagcggcgctcaagggcacctccaccgagagcattcccctg
ctcgacggcccggatctcgagcaggcgctggtggacgcccaggcacggcggctggagctc
aggcgccagcgggaagagctggccaacaccttcaacctgcaggagctcagcaacagcggc
ctgcacaaccagctcgacgagctgcgccagcaactgcgccagacccagcagaacctggat
cagctgcagtttaccgaggagcagggccggcaacagaacgccaaccgtattctggccatg
gtgcgggagcagagcctgcagcgccgcattcagatgctggagctggagcagctgtcctcc
ggcaaccgggacaccctcaacaagctcaggctggagatactgcaaagccggctgacggat
ctcgaccagtacatcgacgccctgcaaaaccggcagaatgagctgcgccgggccaccacc
gaggcggccattgccgaaagcgaacggctgctggacgaggtgcagaccgactcgcctttg
ctggcccgggagcaggagcgcaaccagcaactgtcggccaccctggtggagcgcagccgc
accatcgagtcgctgcaactggaaaaccaggcggtggaaagcgccgtcagcgagctcacc
accctcaagaacaacctcaaggagcaactggagtggctggaggtcagccggggctttggc
gagaacctgcgcaaccgcctgagcgagctgccaaccccctaccccctgcctcagctggaa
gcccgcatcgtgcaaagccgggtagacaaatacagctatcaggaagatctcgacgacatt
gccaacaacagctaccgcaaccggctgctgaccctggagcagggtctgagcgaagaacag
ctgttgctgctcgacgaactgctcaccacccgggcccgcctgctggagcggctgcaggcc
gccaccgacactcagatccacgagcagacccggctcaaggtggcctacagccggcagaac
ggccagctggaagaaatccgggcgctgaccgaagagcgactgttttggctgccggacctg
cgccccgttggcagcggctttcccgccgccctgcgggaaaccctggagtggctgactctg
ggcgccacctggaccgccctgcccaaggcgctgcagcagcagggcggcgccagcctgacc
ctgtacggtatcagcaccctggtggtgctctacctctggctgctgagccggcgcagcctg
cgagattacctgacacggatcagcccgcgcattggcaacgtcacccaggacaagtacggc
tacaccttcaataccctgctgctgagtctgctcaccgccctgccgctgccggcgctgttg
tcgctgctgtcccatgccatcgactcgcccctggcctcgcccatagtggtgtcgctgtcg
gcggcgctgcgggagctgatgctgccggtgttcattctgctgctggtgggtaacctgacc
ctgccaaaagggctgctggtgatgcatttcaacctgcctgccgagcaggtacgccgggtc
tggcgccagttccgcaccctgatgctgagcctactgcccatgctgctgctgctatacacc
tcccgggaattcagggagttctccctctacgacaccctggggcggctggcctttgtctat
acctgcgtgctgatgagcctgttttcctggcgactttaccgtcaggacatgccgctgctg
gtgtcatcaccgcgccaggagcacctgaccctggccaaccacctgctatgggggctgctg
atcaccgcgccgctgctggctctggccgccgccatcatgggctatctgttcaccgcccat
accctgctgcgccagctggaaatctcggtgctggccggcctgggctttgtgatggcgtat
ttttcggtgcgccgctggatgctgctgcagcgccggcgcctggcttttgaacgggccaag
gcaaggcgggcggaaatcctggcccagcgcaaggaaaaagagcgggacgaaccccaggaa
acgccgcccagccccgaagcggaggccgccgccgtggccgaggtggatctcgacgccatc
agtgcccagtcgctggggctgctgcgctcggtgctgatgctgggctacattctcaccctg
atgctgctgtggtccgagatcaacaccgccttcagctttctcgacagcatcgaagtctgg
cacgtgtccagcagcctggccggggaagataccctggtgcccatctcactcaaggatctg
gtgattgcggtctttctggtggtgctcaccctggtgaccgcccgcaacctgccgggtctg
atggagctgagcgtgctgcagcacctggatctgtctcccggcaccggctttgccatcacc
accatttccaaatacctggtgctggtgttcggtgcctttgccacctttgccatgctcggc
atcgactggtccaagctgcagtggctggtggcggcgctgtcggtaggcctgggctttggc
ctgcaggagattttcgccaacttcgtctcgggcctgatcattttgtttgaaaagcccatt
cgcatcggcgacaccgtcaccattcgggatctcaccggtaccatttccaagatcaagacc
cgggccaccaccatagtggactgggacagacgcgagatcatcgtgcccaacaaggccttt
attaccgagcagtttgtcaactggtcgctgtcggacgccattacccgggtcaaactctat
gtgcgggtgcggctggacgcggacgtggagctggtgcaggggctgctgcaggaagccatt
gacgagtgcagcctgatcctcgacaacccggtgcccgaagccttcctggtggagctgacc
gattctgccctggtatacgaggtgcgggtctatgtaaacgacatgggccatcgcatgccc
atgacccacgaactgcacaacctgctgctggagcggctgcgccggcatgatattcgaatt
ccccatcaacaggtggacattcggctggtgggcgagcacaacgcggccctggccggcacc
tccaacaaggccgccgaaccaggctaa
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