Oceanimonas sp. GK1: GU3_05525
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Entry
GU3_05525 CDS
T01667
Name
(GenBank) ATP-dependent helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oce03021
]
GU3_05525
Transcription machinery [BR:
oce03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
GU3_05525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Spc24
Motif
Other DBs
NCBI-ProteinID:
AEY00862
UniProt:
H2FZ21
LinkDB
All DBs
Position
complement(1189036..1191909)
Genome browser
AA seq
957 aa
AA seq
DB search
MPFSLGQRWISDTETDLGLGTVVAIDVRMVTMLFPACGENRMYAINDAPVTRVMFNPGDV
ISSHEDWELEVESVSEQDGLLVYHGKRLDTEEETSLKETFLNHFIKLNKPQERLFAGQID
KIGRFNLRYQALMHQFNQRRSPLRGLGSGRIGLIPHQLHIAHEVGNRHAPRVLLADEVGL
GKTIEAGMIIQQQWLSGRAARILILVPDALIHQWLVEMLRRFNLHFALFDEERCVEAFAD
SANPFDTEQLVLCSLDFITKKRKRFEQLADSDWDLLVVDEAHHLVWDAERPSRAYEVVEA
LAENIPGVLLLTATPDQQGHESHFARLRLLDPERFYDYDAFLAEEEEYQPLAEAAEALLG
DAPLDAAALERLTPFMDGEAAARLETPEQRRALLARLLDYHGTGRLLFRNTRQSIKGFPS
RRLHLHPLPLPSQYQTAIRVAGMMGSHQDTAAQALQALYPEEIYRQFEGGDSSWTQFDSR
VDWLLGFLKENRNNKILIITAKAGVALALEEVLRTKEGIRGTVFHEGMSLLERDKAAAYF
AQQEGGAQVMICSEIGSEGRNFQFSHQLVLFDLPLNPDLLEQRIGRLDRIGQKHDIDIHV
PYLEGTAQRALTLWYQQGMDAFGKPNAVGQPVYQQMADRLLELLANHGQDEQALEQLIAD
TRALTDRLTSQMELGRDRLLELNSSGALQHHNLAEQLAEADEDPTLAIFAIKLFDEIGVH
QDDKGENAIVLRPTEQMLVPSFPGLPEDGASITFDRNTTLSRDDLQFLSWDHPMIRGGID
LVLGSEIGTTSVAILKNKALPVGTQFVEPIFVAESAHHAQLYRFLPPAPIRLLLDKNGNN
LADKVSFEAFDKQLSPVNRHLGSKLVNASQTLIHQQLQSALPLAEQQMEQLVAEARDRMH
QAMDQELSRLQQLAKVNPNVRQSEIDHVQELKTELDSLLSHTRLKLDAIRFIVVSHQ
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgcctttttccctcggccaacgttggatcagcgataccgaaaccgatctgggactggga
accgtggtcgccattgacgtgcgcatggtcaccatgttgttccccgcctgtggtgaaaac
cgcatgtacgccatcaacgatgctcccgttacccgagtcatgttcaaccccggtgatgtc
atcagcagccatgaagactgggagctggaggtggagtcggtgtccgagcaggatggcctg
ctggtctatcacggtaaacgtctggataccgaagaggaaaccagtctgaaggaaaccttc
ctcaatcatttcatcaagctgaacaagccccaggagcggctgtttgccggccagatcgac
aaaattggccgcttcaacctgcgctaccaggcgctgatgcaccagttcaatcagcgccgc
tctcccctgcgcggcctgggcagcggccgcattggcctgatcccgcaccagctgcacatt
gcccatgaagtgggtaaccgccatgccccccgggtgctgctggctgacgaggtgggactg
ggcaaaaccattgaagcgggcatgatcattcagcagcagtggctgtcaggccgcgccgcg
cgcattttgatcctggtgcccgatgcgttgatccaccagtggctggtggaaatgctgcgc
cgctttaatctgcactttgcgctgtttgacgaagagcgctgcgttgaagcctttgccgat
tcggccaatccctttgacaccgagcaactggtgctgtgcagcctcgatttcattaccaaa
aagcgcaagcgctttgagcagctggccgatagcgactgggatctgctggtggtggacgaa
gcccatcacctggtatgggatgccgaacgccccagccgggcttatgaagtagtggaagcc
ctggccgaaaacattcccggggtcctgctgctcaccgccacgccagaccaacagggccat
gaaagccactttgcccgactgcgcctgctcgacccggagcggttctacgactacgacgcc
tttctggcggaagaagaggaataccagcccctggccgaggccgccgaggccctgctggga
gatgcgcccctcgatgccgccgcccttgagcgactgacaccctttatggacggtgaagcc
gctgcccgcctggagacccccgagcaacgccgggcgctgctcgcccgactgctggactac
cacggcaccggccgtctgctgttccgcaatacccgccagtccatcaagggctttccgtca
cgtcggttgcacctgcacccgctgcccctgccttcccagtaccagaccgccattcgcgtg
gctggcatgatgggctcgcatcaggacaccgccgcccaggcgctgcaggcgctgtatccg
gaagaaatctaccgccagtttgaaggtggcgacagcagctggacccagttcgacagccgg
gtcgactggctgctgggctttctcaaggaaaaccgcaacaacaagattttgatcatcacc
gccaaggccggggtggcactggccctggaggaagtgctgcgcaccaaggagggcattcgc
ggcaccgtgttccacgaaggcatgtcgctgctggagcgggacaaggccgccgcctacttt
gcccagcaggaaggcggtgcccaggtgatgatctgctctgaaatcggctccgaaggccgc
aacttccagttttcccaccagctggtgttgtttgacctgccgcttaacccggatctgctg
gaacaacgcattggccgcctggatcgcatcggccagaaacacgatatcgacattcacgtg
ccctacctcgaaggcaccgcccagcgcgccctaaccctgtggtatcagcagggcatggac
gcctttggcaagcccaatgccgtgggccagccggtctaccagcaaatggccgaccggctg
ctggagctgctcgccaatcacggtcaggatgagcaagcactggaacaactgattgccgat
actcgcgccctgaccgaccgcctgaccagccaaatggagctgggccgggatcgcctgctg
gagctcaattccagcggcgccctgcagcaccataatctggccgagcagctggccgaagcc
gacgaagatcccaccctggccatttttgccatcaagctgtttgatgaaattggagtccat
caggacgacaagggtgaaaacgccattgtgctgcgccccaccgaacaaatgctggtgccg
agttttcccggcctgcccgaggatggcgccagcatcacctttgatcgcaacaccaccctg
agccgggatgatctgcagtttttgagctgggatcatcccatgatccgcggcggcatcgac
ctggtgctgggctcagagatcggcaccacctcggtggccattctcaaaaacaaggcgctg
ccggtgggcacccagttcgtggagcccattttcgtggccgaatctgcccaccatgcccag
ctgtaccgctttctgccgccggcccccattcgactgctgctcgacaaaaacggcaacaac
ctggccgacaaggtcagctttgaggcctttgacaagcaactcagtccggttaaccgtcac
ctgggcagcaagctggtgaatgcatcccaaaccctgatccatcaacagttgcaaagcgcc
ctgccgctggccgagcaacagatggagcaactggtggccgaggcccgtgaccgcatgcat
caggcgatggatcaggagctgagccggctgcagcagctggcgaaggtcaaccccaatgtg
cgccagagcgagatcgaccatgtgcaggagctgaaaaccgagctcgacagcctgctcagc
catacccgcttaaaactggacgccattcggtttattgtggtcagccatcagtaa
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