Oceanimonas sp. GK1: GU3_06670
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Entry
GU3_06670 CDS
T01667
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oce03400
]
GU3_06670
DNA repair and recombination proteins [BR:
oce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
GU3_06670
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_16
AAA_22
DZR
AAA_30
SLFN-g3_helicase
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AEY01090
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Position
complement(1441781..1443520)
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AA seq
579 aa
AA seq
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MFTLRPYQQEAVDRTLDYFRRHSEPGVLVLPTGAGKSLVIAELARLARGRVLVLAHVREL
VEQNHAKYQAYGIEADIFSAGLKRRESSRQVVFGSVQSVARNLDAFSGFNLVVIDECHRV
SDDDNSQYAQVIHHLRQSNSALKVLGLTATPYRLGLGWIYRTHHHGMVRSRGPRFFEHCL
FELPLRLMIKQGYLCPPELVDAPVVHYDFSRLYEQGLFTEQALERELARQPRVTPHVVEQ
IKDYAEDRQGVMIFAATVRHATEIAGLLPAEHTALVTGDTPGPERDAIIARFKARELKFL
VNVAVLTTGFDAPHVDLIAILRPTQSVALYQQIIGRGLRLSPGKTDCLVLDYAGNNMDIF
APEVGEPRPNPDTTQVQVPCPACGFANVFWGKTDSEGRVLEHFGRRCQGLFEHDDEREEC
GYRFRFKSCPHCLAENDIAARQCHDCGAVLVDPDQKLKDALALKDALVLRCAGLTLENGS
GKYGPALKVTYHDEDGTELQKWYAFDAKGPKGRFYKEFVRPHWPAPGTEPDFASLEQVLA
VAARFRHPDFVIARAFKRGWQVRETIFDYQGRFRTAHAL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtttacattacgtccctatcagcaggaggcggtggatcgcactcttgattatttccgc
cgccacagcgagccgggggtgctggtgctgcccaccggcgccggcaaaagcctggtgatc
gccgagctggcacgcctggcccggggccgggtgctggtgctggcccatgtgcgcgagctg
gtggagcagaaccacgccaagtatcaggcctatggcattgaggccgatattttctccgcc
ggcctcaagcgccgggaaagcagtcgccaggtggtgttcggctcggtgcagtcggtggcc
cgcaatctggacgccttcagcggctttaatctggtggttatcgacgaatgccatcgggtg
tccgacgacgacaacagccagtatgcccaggtcattcaccacctgcgccagagcaattcg
gcactcaaggtgctggggctcaccgccaccccctaccggctgggactgggctggatttac
cgcacccatcaccatggcatggtgcgcagccggggcccgcgcttttttgaacattgcctg
tttgaactgcccctgcggctgatgatcaaacagggttacctgtgcccgccggagctggtc
gacgctcccgtggtgcattacgacttttcccgcctgtatgagcaaggactgtttaccgag
caggcgctggagcgggaactggcccgccagcccagggtgacgcctcatgtggtggagcag
atcaaggactatgccgaagatcgccagggggtgatgatcttcgccgccaccgtgcgccat
gccaccgaaatagccggcctgctccccgccgagcacaccgccctggtgaccggcgacact
ccggggccggagcgggacgccatcattgcccgcttcaaggcccgggagctgaaatttctg
gtcaacgtggcggtgctcaccaccggctttgacgccccccatgtggacctgattgccatt
ttgcgccccacccagtcggtggccctgtaccaacagatcatcggccggggccttcgcctc
agcccgggcaagaccgattgcctggtgctggattatgccggcaacaacatggacatcttc
gccccggaagtgggcgagcccagacccaaccccgacaccacccaggtgcaggtgccctgc
cccgcctgcggctttgccaatgtcttctggggcaagaccgacagtgaaggccgggtgctg
gagcatttcggccgccgctgccaggggctgtttgaacacgacgatgagcgggaagaatgc
ggctaccggtttcgctttaaaagctgcccgcactgcctggcggaaaacgacatcgccgcc
cgccagtgccacgactgcggcgcggtgctggtggatcccgatcaaaaactgaaagacgcc
ctggcgctgaaggacgccctggtgctgcgctgcgccggcctcaccctggaaaacggcagc
ggcaagtatggcccggcgctcaaggtgacctaccacgacgaggacggcaccgagttgcaa
aaatggtatgctttcgatgccaaaggccccaagggccgtttttacaaggaatttgtgcgt
ccgcactggccggcgccgggcaccgagcccgactttgccagcctggagcaggtgctggcc
gtcgctgcccgttttcgccacccggactttgtgattgcccgggcctttaagcggggctgg
caggtacgggaaaccattttcgattaccagggccggtttcgtaccgcccatgccttataa
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