Oceanimonas sp. GK1: GU3_06765
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Entry
GU3_06765 CDS
T01667
Name
(GenBank) membrane-bound lytic murein transglycosylase D
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
oce01011
]
GU3_06765
Enzymes [BR:
oce01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GU3_06765
Peptidoglycan biosynthesis and degradation proteins [BR:
oce01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GU3_06765
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
Motif
Other DBs
NCBI-ProteinID:
AEY01109
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All DBs
Position
complement(1466038..1467420)
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AA seq
460 aa
AA seq
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MIRLCILSGALLLAGCQAVSTDSARQTHGHQNRTEEQNSRPLYPKSGNYTALKAAGRDSR
HSSDEGPQAHRGEARQQDLWQAIADDMTLDIPADHPRVVAQRKWYLKQPGYMQAVSERAR
PFLYLIKEEIEKRDMPMELALLPVVESTFDPKAYSHGHAAGLWQMLQSTGKNFGLHYDSW
YDGRYDIMASTRAALDYLEYLHKFFDGNWTHALAAYNSGEGRVQRAIRANRRHGKPTDYW
SLSLPKETQNYVPKLMALADILKQPDHYGMDVPALPNRPQVTAVAVEGQVDLNMAADLAG
VSRSQLKELNPAFKHTTTSPQIDTQILVPVRHAESFELAMADLPAAERQQYQRYRVKGGD
SLGVIARRYGTHITALRQANNLSGNTIRIGQTLLVPASAAPAPAHTSTESSTYQVQAGDS
LSVIASRFSVSIADLLRWNRLSNQHMLRAGQQLIVAANSG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgataagactttgcattttatccggtgccttgctcctggctggctgccaggcggtatcg
accgattcggcgcgccagacccatggtcaccagaaccgcaccgaagagcaaaacagccgg
ccgctgtaccccaaatcaggcaactacaccgcgctcaaggctgccggtcgcgacagccgt
cattcttccgatgaaggcccgcaagcgcaccggggcgaagcccgccagcaggatctgtgg
caggccatcgccgacgacatgacgctggatattcctgccgaccaccctcgggtggtggcc
cagcgcaagtggtacctgaaacagccgggctatatgcaggccgtctccgaacgggccaga
ccgtttctctatctcatcaaggaagagatagaaaagcgggacatgccgatggagctggcc
ctgctgccggtggtagagagtacctttgatcccaaggcctattcccacggccatgccgcc
ggcctgtggcagatgctgcagagcaccggcaagaactttggcctgcattacgacagctgg
tacgacggccgttacgacatcatggcctcgacccgggcagccctcgactacctggagtac
ctgcacaagttctttgatggcaactggactcacgctctggccgcctacaactcgggggaa
ggccgggtgcagcgcgccattcgcgccaaccgtcgccacggcaagccgaccgactactgg
tcattgtcgctgcccaaggaaacccagaactatgtgcccaaactgatggccctggccgac
attctcaagcagcccgatcattacggcatggacgtgcccgcgctgccgaaccgcccccag
gtgacggcggtggcggtggaaggtcaggtggatctgaacatggccgccgatctggccggg
gtcagccgcagtcagctcaaggagctgaacccggcgttcaagcacaccaccacctcgccg
cagatcgatacccagatcctggtgccggtgcgtcacgccgaaagctttgaactggccatg
gcagacctgcctgcggcagagcgccaacagtaccagcgctaccgggtcaagggcggcgac
agcctgggcgtgatcgcccgccgttacggcactcatattaccgccctgaggcaggccaac
aacctgagcggcaacaccattcgcattggtcagaccctgctggtgcccgcttccgccgca
ccggcaccggcccataccagcacggaaagcagcacctaccaggtgcaggccggcgattcg
ctgtcggtgatcgccagccgtttcagcgtcagcatcgccgatctgctgcgctggaaccgg
cttagcaaccagcacatgctgcgcgccggtcagcagctgatcgtggccgccaattccggc
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