Oceanimonas sp. GK1: GU3_06905
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Entry
GU3_06905 CDS
T01667
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
oce
Oceanimonas sp. GK1
Pathway
oce03030
DNA replication
oce03430
Mismatch repair
oce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GU3_06905
03430 Mismatch repair
GU3_06905
03440 Homologous recombination
GU3_06905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oce03032
]
GU3_06905
03400 DNA repair and recombination proteins [BR:
oce03400
]
GU3_06905
Enzymes [BR:
oce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GU3_06905
DNA replication proteins [BR:
oce03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GU3_06905
DNA repair and recombination proteins [BR:
oce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GU3_06905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RecJ_C
Motif
Other DBs
NCBI-ProteinID:
AEY01137
LinkDB
All DBs
Position
1501791..1502522
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AA seq
243 aa
AA seq
DB search
MVYLRPSALVQPARATDWPGLFEQRARSARDYRLQRFYRAGLPAPDTPLAEVPLVAMDFE
TTGLNADRDAIVSIGLVPFTLQRIRCREAGHWIVNPHKPLAGETVALHHITHSEVKEAPD
LLQVLDEVLAALAGRVVVVHYRRIEQVFFAAALKARLNEDIRFPVIDTMALEARFHPRQL
SLWDRLRRRKPASIRLAACRERYHLPYYTPHHALTDALATAELLQAQVAYHYSPDTPLSE
LWL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggtatacctgagaccctctgccctggtgcaacccgcccgggccaccgactggccgggg
ctgtttgaacagcgggcacgcagcgcccgggattaccggctgcagcgcttttaccgggcc
ggtttgccggcccccgacacccccctggccgaggtgccgctggtggccatggattttgaa
accaccgggctcaatgcagatcgggatgccatcgtcagcattggtctggtgccctttacc
ctgcaacgcattcgctgccgtgaagcgggccactggattgtgaatccgcacaagccgctg
gcaggagaaaccgtggccctgcaccacattacccactccgaagtgaaggaagccccagac
ttgctgcaggtgctggacgaggtgctggcagccctggcaggcagggtggtggtggtgcac
taccggcgcattgaacaggtgttttttgccgccgccctcaaggcccggctcaacgaggac
attcgttttccggtgatcgacaccatggcgctggaagcccgctttcaccccagacagctc
agcctgtgggaccggctgcgtcggcgcaagccggcctccattcgtctggctgcctgtcgg
gagcgttatcacctgccttattacacccctcatcatgccctgaccgatgccctggccacc
gccgagctgctgcaggcccaggtggcgtatcattattcgccggacacgccgctcagtgag
ctgtggctgtaa
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