Oceanimonas sp. GK1: GU3_07280
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Entry
GU3_07280 CDS
T01667
Symbol
nusA
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oce03021
]
GU3_07280 (nusA)
03009 Ribosome biogenesis [BR:
oce03009
]
GU3_07280 (nusA)
Transcription machinery [BR:
oce03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
GU3_07280 (nusA)
Ribosome biogenesis [BR:
oce03009
]
Prokaryotic type
rRNA transcription factors
GU3_07280 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
KH_2
McpB_HAMP_2
MRP-S35
YkuI_C
Motif
Other DBs
NCBI-ProteinID:
AEY01212
UniProt:
H2FSV5
LinkDB
All DBs
Position
1580705..1582207
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AA seq
500 aa
AA seq
DB search
MNKEILLVVDAVSNEKAVPREKIFEALETALATATKKKYDGDIEVRVAIDRKSGDFDTFR
RWQVVADQESLTNPYREITLEAAQIDEPEIEVGDYVEDQIESITFDRITTQTAKQVIVQK
VREAERMQVVEQFQDQEGEIITGVVKKATRDNVILDLGNNAEAVIFREDLLPRESFRSGD
RVRGLLYAVRPEARGAQLFVSRSNPEFLKELFRIEVPEIGEEIIEIMAAARDPGSRAKIA
VKTNDRRIDPIGACVGMRGARVQAVSGELGGERVDIVLWDDNPAQFVINAMAPADVASII
VDEDAHSMDIAVEAGNLAQAIGRNGQNVRLASQLTGWELNVMTVEDLQQKHQAENDKIIT
LFVDNLDIDDDFAALLVGEGFSTLEEIAYVPVSELLSVEGLDEDTVEELRSRAKDALTTK
ALAQEESFEGVEPAEDLLGLSGMTRELAYQLAARGVSNLEELAEQGIDDLDGIDGLDEAQ
AGELIMAARNICWFGEQNED
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaatattgctggttgtagacgccgtttccaacgaaaaggcggtgcctcgc
gaaaaaatctttgaggcgctggaaaccgcgctggccaccgccaccaagaaaaaatacgac
ggcgacatcgaggtacgggtagccatcgaccgcaaaagcggcgatttcgataccttccgt
cgctggcaggtggtggcggatcaggaatccctgaccaacccctaccgggaaatcaccctg
gaagcggcccagatcgacgaacccgagattgaagtcggcgattatgtcgaggatcaaatc
gaatccattacctttgaccgcatcaccacccagaccgccaagcaggtgatcgtgcagaag
gtgcgcgaagccgagcgcatgcaggtggtggagcagttccaggatcaggaaggcgagatc
atcaccggtgtggtgaaaaaggccacccgcgacaacgtgatcctggatctgggcaacaac
gccgaggcggtgatcttccgcgaagatctgctgccgcgcgagtcgttccgctccggtgac
cgggtgcgcggtctgctctatgcagtccgtcccgaagcccgtggcgcccagctgttcgtc
agccgctccaatcccgagttcctgaaagagctgttccgcattgaagtgccggaaatcggc
gaggaaatcattgaaatcatggccgccgcccgggatccgggcagccgggccaagattgcg
gtcaagaccaacgaccgccgcatcgatcccatcggtgcctgtgtgggcatgcgtggcgcc
cgggtgcaggcggtgtccggcgagctcggtggcgagcgggtggacatcgtgctgtgggac
gacaacccggcccagttcgtgatcaatgccatggccccggcggatgtggcgtccattatc
gtggacgaagatgcccactccatggacatcgcggtggaagccggcaacctggcccaggcc
atcggtcgcaatggtcagaacgtgcgtctggcgtcccagctcaccggctgggagctgaac
gtgatgacggtggaagacctgcagcagaagcaccaggccgagaatgacaagatcatcacc
ctgttcgtggacaacctggacatcgacgatgactttgctgctctgctggtgggtgaaggc
ttctccaccctggaagaaatcgcctacgtaccggttagcgaactgctgagtgtggaaggc
ctggacgaagacaccgtcgaggaattgcgcagccgggccaaggatgcgctgaccaccaag
gcgctggcccaggaagagtcttttgaaggggtagagccggcagaggatctgctggggctg
tccggcatgacccgcgagctggcctatcagctggccgcccgcggtgtttcgaatctggaa
gagctggcagaacagggcattgacgacctggacggtattgacggtctggatgaggcccag
gcgggcgaactcatcatggctgcccgtaacatctgctggttcggagagcagaacgaagat
taa
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