Oceanimonas sp. GK1: GU3_07295
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Entry
GU3_07295 CDS
T01667
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oce03016
]
GU3_07295
Enzymes [BR:
oce01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GU3_07295
Transfer RNA biogenesis [BR:
oce03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GU3_07295
Prokaryotic type
GU3_07295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AEY01215
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All DBs
Position
1585418..1586353
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AA seq
311 aa
AA seq
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MGRQRRFRGREVDGILLLDKPAGITSNDALQQVKRIYAAAKAGHTGALDPLATGMLPICL
GEATKFSQFLLDADKRYRVIAKLGERTDTSDADGEVVETRPVKVSAGELIDALDHFRGDI
MQIPSMYSALKYQGKPLYQYAREGIDVPREARPITVFELTLIRFEGDEVELEIHCSKGTY
IRTIVDDLGERLGCGAHVTMLRRLAVAGYPAERMLTLEQLQCILDNCKANDISPRLELDP
LLLPMDTAVQSLPEVNLSELVAGYLLHGQAVQVAGAPLEGFVRMTVGEDHRFVGVGEIDD
DGKVAPRRLVR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtcagcgacgttttcgcggccgtgaggtagacggcattctgctgctcgacaag
ccggcgggcatcacctccaacgatgcgctgcagcaggtcaagcgcatctatgccgccgcc
aaggccggccacaccggcgccctggatcccctggccaccggtatgctgccgatctgcctg
ggtgaggccaccaagttctcccagttcctgctcgatgccgataaacgctaccgggtgatc
gccaagctgggcgagcgcaccgacaccagcgacgccgatggcgaagtggtggaaacccgg
ccggtgaaggtatctgccggcgagctgattgacgccctggatcatttccgcggcgacatc
atgcagatcccgtccatgtactcggcgctcaagtaccagggcaagcccctgtaccagtac
gcccgggaaggcattgacgtgccccgggaagcccggccgatcacggtgtttgagctcacg
ctcattcgctttgaaggggacgaggtggagttggaaatccactgtagcaagggcacctac
attcgcaccattgtcgacgacctgggtgaacggctgggctgcggtgcccacgtcaccatg
ctgcgccggctggcggtggccggttacccggcggagcgcatgctgaccctggagcagttg
cagtgcattctcgacaactgcaaggctaacgacatttctccccgactggagctggatcca
ctgctgctgccgatggacaccgcggtgcagagcctgcccgaggtgaacctgtcggagctg
gtggccggctacctgctgcacggccaggcggtacaggtagcgggtgcgcccctcgagggc
tttgtgcgcatgacggtaggggaagaccaccgctttgtcggcgtcggtgaaatcgacgac
gacggcaaggtggcgccgcgccggctggtgcgctga
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