Oceanimonas sp. GK1: GU3_10955
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Entry
GU3_10955 CDS
T01667
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oce03009
]
GU3_10955 (rimO)
Enzymes [BR:
oce01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GU3_10955 (rimO)
Ribosome biogenesis [BR:
oce03009
]
Prokaryotic type
ribosomal protein modification factors
GU3_10955 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
AEY01947
UniProt:
H2FWG5
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All DBs
Position
2380072..2381385
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AA seq
437 aa
AA seq
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MSVPRIGFVSLGCPKNLVDSERILTQLRIEGYDVVPSYDDADMVIVNTCGFIDSAVQESL
EAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHRYVPRPEYNP
FVNLVPEQGVKLTPKHYAYLKISEGCNHKCTFCIIPSMRGDLDSRPIGDVLAEAGRLADA
GVKELLVISQDTSAYGVDVKHKTGFASGMPVKTHIQALCEELGKMGVWVRLHYVYPYPHV
DDLIPLMRDGKILPYLDIPLQHASPRILKLMKRPGAVERTLERIRRWREICPELTIRSTF
IVGFPGETEEDFQMLLDFIEQAELDRVGCFTYSPVEGARANELADPVPEDVKQERYERFM
ALQQQISTRRLAQKVGKTIQVLIDEVDEEGAIGRSSADAPEIDGMVYLNGETGLKPGDMV
NVTVTHSDEYDLWAELA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttccccgtatcggctttgtgtctctcggctgcccgaaaaacctggtcgactcc
gagcgtattctgacccagctgcgtatcgaaggttacgacgtggtgccttcctacgatgat
gccgatatggtgatcgtcaatacctgtggttttatcgacagcgccgtacaggaatctctg
gaagccatcggcgaggccctcaacgaaaacggcaaggtgatcgtcaccggctgcctgggc
gccaaggaagatcagatccgtgaagtgcaccccaaggtgctggaaatcaccggcccccat
tcctacgagcaggtactggagcatgtacaccgctatgtgccgcgcccggaatacaacccc
ttcgtcaacctggtgcccgagcagggcgtcaaactgacccccaagcactacgcctacctg
aagatctccgaaggctgcaaccacaagtgcaccttctgcattattccgtccatgcggggc
gatctggacagccgtcccatcggtgacgtgctggccgaagcgggccggctggcggacgcc
ggcgtgaaagagctgctggtgatctcccaggacacttccgcctacggggtggatgtgaag
cacaaaaccggttttgccagcggcatgccggtgaagacccacattcaggccctgtgtgaa
gagctgggcaaaatgggcgtgtgggtgcgcctgcattacgtttacccctacccgcacgtg
gacgaccttattccgctgatgcgtgacggcaagatcctgccctacctggatattccgctg
cagcacgccagcccgcgcattctcaagctgatgaagcgccccggcgcggtggagcgcacc
ctggagcgcattcgccgctggcgggaaatctgccccgagctgaccattcgctccaccttt
attgtgggctttcccggtgagaccgaggaagactttcaaatgctgctcgactttatcgag
caggccgagctggatcgggtgggctgctttacctatagcccggtggaaggcgcccgcgcc
aacgagctggcggatccggtgccggaagacgtcaagcaggaacgctacgagcgctttatg
gcgctgcagcagcagatttccacccgtcgcctggcccaaaaggtgggcaagaccatacag
gtactgatcgacgaggtggatgaggaaggtgccatcggccgctccagcgccgatgccccg
gaaatcgacggcatggtctatctgaacggtgaaaccggcctcaagcccggcgacatggtc
aatgtgaccgtcacccactccgacgagtacgacctctgggccgagctggcctga
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