Oceanimonas sp. GK1: GU3_11290
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Entry
GU3_11290 CDS
T01667
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oce03032
]
GU3_11290
03400 DNA repair and recombination proteins [BR:
oce03400
]
GU3_11290
Enzymes [BR:
oce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GU3_11290
DNA replication proteins [BR:
oce03032
]
Prokaryotic type
DNA Topoisomerases
GU3_11290
DNA repair and recombination proteins [BR:
oce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GU3_11290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AEY02013
UniProt:
H2FWN1
LinkDB
All DBs
Position
complement(2451590..2454205)
Genome browser
AA seq
871 aa
AA seq
DB search
MTDLAREIMPINIEEELKRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYTLVDGQGNFGSVDGDSAAAM
RYTEVRMDKIAHELLADLDKETVDWVPNYDGTELIPAVMPTKVPNLLVNGSSGIAVGMAT
NIPPHNLNEVVDGCLALIDDEHISIDQLIELIPGPDFPTGGIINGKSGIFDAYRTGRGKI
YVRALAEIETDEKTGRETIIVSELPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG
MRIVIEVRRGEVGEVILNNLYAQTQMQTVFGINMVALDNNQPRTFNLKDMLECFIQHRRE
VVTRRTVFELRKARDRAHILEGLAIALANIDPVIELIRRSPTPAEAKAGLLAQGWELGNV
ASMLERAGDDAARPEWLEPEYGIRDGQYYLTEQQAQAILELRLHRLTGLEHEKILEEYKA
LLDQIAELLHILNSTTRLMEVIREELEAIKEQFGDQRRTEITTSSAEINLEDLITQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGRGKSATRMKEEDFVERLLVANTHDTILCFSTAGKVY
WLKVYQLPEASRTARGRPIVNLLPLGEDERITAILPVKEYADDKAVFFATRQGTVKKTEL
TAFSRPLASGIRAINLTEGDELIGVDITDGDNEIMLFSDAGKVVRFHEDQVRAMGRTATG
VRGIRLGDDDSVVSLIVPRGEGAILTATANGYGKRTSLEEYPTKSRATLGVVSIKVSDRN
GAVVGAIQVDEANEIMLITNGGTLVRTRVSEVSLISRNTAGVRLIRTGEDEQVVGLQRIE
EPEDDDEPIEGEEGLASGSIDDASAPAIDEE
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttggcccgagaaatcatgccgatcaacatcgaggaagagttgaagcgctcc
tatctcgactacgccatgagcgtgatcgtggggcgtgcccttcctgatgttcgagacggc
ctgaagccggtgcatcgccgcgtgctgttcgccatgaacgaactcggcaacgactggaac
aaaccctataaaaagtcggcccgtgtggtgggcgacgtaataggtaaatatcacccccac
ggcgacagcgcggtatacgacaccatagtgcgcatggctcaggacttctccatgcgctac
accctggtcgacggccagggcaacttcggctcggtggacggcgactccgccgccgccatg
cgttacaccgaagtgcgcatggacaaaatcgcccacgaattgctggcggatctggacaag
gaaaccgttgactgggtgcccaactacgacggcaccgagctgatcccggcggtgatgccc
accaaggtgcccaacctgctggtgaacggctcttccggcattgccgtaggcatggccacc
aatattccgccccataacctcaacgaggtggtggatggctgcctggcgctgatcgacgac
gagcacatcagtatcgatcagctgattgagctgatccccggcccggattttcccactggc
ggcatcatcaacggcaagtcgggcattttcgacgcctaccgcaccggccgtggcaagatc
tacgtgcgtgccctggcggagattgaaaccgacgagaaaaccggccgcgagaccatcatc
gtctccgagctgccttaccaggtgaacaaggcgcggttgattgaaaagattgccgagctg
gtcaaagaaaaacggattgaaggcatttccgccctgcgtgacgagtccgacaaggacggt
atgcgcattgtgattgaagtgcgccggggcgaggtgggcgaggtgatcctcaacaacctg
tacgcccagacccagatgcagaccgtgttcggcatcaatatggtggcgctggacaacaat
cagccgcgcaccttcaacctgaaggacatgctggagtgctttattcagcaccggcgcgaa
gtggtcacccgccgcaccgtatttgaactgcgcaaggcgcgggaccgggctcatatcctg
gaaggcctggccattgctctggccaacatcgatccggtgattgagcttattcgccgctca
ccgaccccggcggaagccaaggccgggctgctggctcagggctgggagctgggcaacgtg
gccagcatgctggagcgcgccggtgacgatgccgctcgtccggaatggctggagccggaa
tacggcattcgtgacggccagtactacctgaccgagcagcaggcccaggccattctggaa
ctgcgcctgcaccgcctgacaggcctggagcacgaaaagatcctggaagagtacaaggcg
ctgctggatcagattgccgagttgctgcacattctcaacagtaccacccgcctgatggaa
gtgatccgcgaggagctggaagcgatcaaggagcagtttggcgaccagcgccgcaccgag
atcaccacttccagcgccgagatcaacctggaagacctgatcacccaggaagacgtggtg
gtgaccctgtcccaccagggttacgtcaagtaccagccgctgaccgactacgaggcccag
cgccggggcggccggggcaagtcggccacgcggatgaaggaagaagacttcgtcgagcgg
ctgctggtggccaacacccacgacaccattctgtgcttctccaccgccggcaaggtgtac
tggctcaaggtctaccagttgccggaagccagccgcaccgcccgtggccggcccatcgtc
aacctgctgcccctgggcgaggacgagcgcatcaccgccattctgccggtgaaggaatat
gccgacgacaaggcggtgttctttgccacccgccaggggacggtcaagaaaaccgagctg
accgccttcagccggccgctggcctcgggcattcgcgccatcaacctcaccgagggcgat
gagctgatcggggtggacatcaccgacggcgacaacgagatcatgctgttctccgacgcc
ggcaaggtggtgcgtttccacgaggatcaggtgcgggccatgggccgtaccgccaccggc
gtgcgcggcattcgtctgggcgacgatgacagtgtggtatcgctgatcgtaccgcgcggc
gagggtgccattctgaccgccaccgccaacggttacggcaagcgcacttcccttgaggaa
tatcccaccaagagccgggccaccctgggcgtggtctccatcaaggtgagcgatcgcaac
ggtgccgtggtgggggccattcaggtagatgaagccaacgagatcatgctgatcaccaat
ggcggtaccctggtgcgcacccgagtgtcggaagtgagcctgatcagccgcaacaccgcc
ggcgtgcgtttgatccgcaccggagaagacgaacaggtggtggggctgcagcgcattgaa
gagcccgaagacgacgatgagccgatcgagggcgaagagggcctggcgtccgggagcatc
gatgatgcctccgccccggccatcgacgaggaataa
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