Oceanimonas sp. GK1: GU3_11690
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Entry
GU3_11690 CDS
T01667
Name
(GenBank) putative integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oce03032
]
GU3_11690
03036 Chromosome and associated proteins [BR:
oce03036
]
GU3_11690
03400 DNA repair and recombination proteins [BR:
oce03400
]
GU3_11690
DNA replication proteins [BR:
oce03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GU3_11690
Chromosome and associated proteins [BR:
oce03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
GU3_11690
DNA repair and recombination proteins [BR:
oce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
GU3_11690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Glycos_trans_3N
PqqD
CEP76_N
HU-DNA_bdg
CATASP
Motif
Other DBs
NCBI-ProteinID:
AEY02093
LinkDB
All DBs
Position
complement(2544381..2544662)
Genome browser
AA seq
93 aa
AA seq
DB search
MTKSDLIERLTEQYAHLSAKEVENAIKEILEQMASTLQSGDRIEIRGFGSFSLHYRAPRL
GRNPKTGEKVELNGKYVPHFKPGKELRERVNPA
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatccgacctgattgaacgactgaccgagcaatatgctcatctttctgccaag
gaagtggaaaacgccatcaaggaaattctggagcaaatggcgtcaacgctgcaatcgggt
gaccgtattgaaattcgcggtttcggcagtttctccctgcattatcgggctccccgcctg
ggccgcaatcccaagaccggtgaaaaggtggaactcaacgggaaatacgttccccatttc
aaaccgggcaaggagctgcgtgagcgggtaaacccggcgtga
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