Oceanimonas sp. GK1: GU3_11845
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Entry
GU3_11845 CDS
T01667
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oce03016
]
GU3_11845 (truA)
Enzymes [BR:
oce01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GU3_11845 (truA)
Transfer RNA biogenesis [BR:
oce03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GU3_11845 (truA)
Prokaryotic type
GU3_11845 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AEY02124
LinkDB
All DBs
Position
complement(2579060..2579851)
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AA seq
263 aa
AA seq
DB search
MRIALGIEYDGSRYYGWQRQREVPSVQEELEKALSKIADHPVDVQCAGRTDAGVHGTAQV
VHFDTQASRPDGAWTLGMNTNLPPDIAVRWVKAVPDDFHARFSATARRYRYIIFNHNMRP
AIHGAGVSHYAGHIDADRMHEAGQCLLGERDFSAFRAVQCQSKSPYRNVMHLKVQRFGHY
IVLDIKANAFLHHMVRNITGTLLKVGMGEADGAWVQEVLEGRDRNLAGVTAKAGGLYLVG
VDYPQEFGLPVTIPGPLWLPDPL
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgcccttggcatagagtatgacggtagccgctattacggctggcaacggcag
cgggaagtccccagtgtccaggaagagctggaaaaagccctttcaaaaatcgccgatcac
ccggtggacgtgcagtgtgccggtcgtaccgacgccggggtgcacggcaccgcccaggtg
gtgcacttcgacactcaggccagccgcccggacggcgcctggaccttgggaatgaacacc
aacctgccaccggatatcgcagtgcgctgggtgaaggcggtgcccgatgactttcacgcc
cgcttcagcgccaccgctcgtcgctaccgctacattatcttcaatcacaatatgcgcccg
gccatccacggtgccggcgtcagtcactacgccggtcatatcgacgccgaccgtatgcac
gaggcgggtcagtgcctgctgggcgaacgggatttcagcgcctttcgtgcggtacagtgc
cagtcgaaaagcccgtatcgcaacgtgatgcatcttaaggtgcagcgatttggccactat
attgtgctcgacatcaaggccaatgcctttttgcaccacatggtgcgcaacatcaccggc
accctgctgaaggtgggcatgggggaggccgacggcgcctgggtacaggaagtgctggaa
ggccgggatcgcaatttggccggggtcaccgccaaggccggtgggctttatctggtgggg
gtggattacccgcaggagttcgggttgcccgtgaccattcctggcccgctgtggctgccg
gacccactctga
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