Oceanimonas sp. GK1: GU3_12210
Help
Entry
GU3_12210 CDS
T01667
Name
(GenBank) rubisco operon transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oce03000
]
GU3_12210
Transcription factors [BR:
oce03000
]
Prokaryotic type
Helix-turn-helix
LysR family
GU3_12210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
PBP_like_2
PBP_like
HTH_5
HTH_20
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AEY02197
UniProt:
H2FX65
LinkDB
All DBs
Position
2659632..2660597
Genome browser
AA seq
321 aa
AA seq
DB search
MNVRHLTFRLLQVYVAVVRLGSVSKAAAQLHLTQPTVSQQLKRLAEAVGEPLLDNQMKPT
FIGTELYHAALDALSRLDDFGGFLQDARQGTRGSFSIGVVTTAKYILPRLLGPFNRQYPG
VEVSISVGNRGYILERHRHQQDDVYLFSHPPSGEHTLSGRFIHNPLVLITPPDHWALKQP
PVSFADLLNERFLLREPGSATRLVFEEWLRSRNLQLKRVMQIESNEVIRMSVEQGLGLAV
LSEHTLAEGQQRLGRPALAEFPLGSYWYLVCHGDRRLPYPAANFVHFVNDHLARCVDERY
IHNDLAALLGHIGDGTPTPSP
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgcgtcatctgacctttcgcctgttgcaggtgtacgtggccgtggtccggctg
ggctcggtatccaaggccgcggcccagctgcatctgacccagcccacggtatcccagcag
ctcaagcgcctggccgaggccgtgggcgagccgctgctcgataaccagatgaaacccacc
tttatcggtaccgagctctatcacgccgccctcgacgccctgtcccgccttgacgacttc
ggcggttttttgcaggacgcccgtcagggcacccggggcagcttcagcatcggggtggtg
accaccgccaaatacatactgccccggctgctgggcccctttaaccggcaataccccggg
gtggaagtgtccatcagcgtcggcaaccggggctatattctggaacgtcaccgccaccag
caggacgatgtctatctgttcagccatccgccaagcggcgagcacaccctgagtggccgc
tttattcacaatcccctggtgctgatcacgcccccggatcactgggcgctcaaacaaccg
ccggtcagttttgccgacctgctcaacgaacgctttctgttacgggagccgggcagcgcc
acccggctggtatttgaggaatggctgcgcagccgcaacctgcagctgaagcgggtgatg
cagatagaaagcaacgaggttattcgcatgagcgtggagcagggactggggctggcggtg
ctctcggagcacactctggcggaaggtcagcagcgtctgggccgcccggccctggccgaa
ttcccgctgggcagttactggtatctggtgtgccacggcgaccgccgattgccctacccg
gccgccaacttcgtgcactttgtcaacgaccacctcgcccgctgcgtggatgagcgctac
attcacaacgatctggccgccctgctggggcatatcggcgatggcactccgaccccatcg
ccctga
DBGET
integrated database retrieval system
