Oceanimonas sp. GK1: GU3_12390
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Entry
GU3_12390 CDS
T01667
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oce03400
]
GU3_12390
Enzymes [BR:
oce01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GU3_12390
DNA repair and recombination proteins [BR:
oce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GU3_12390
Prokaryotic type
GU3_12390
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEY02233
UniProt:
H2FXA1
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All DBs
Position
complement(2697325..2698734)
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AA seq
469 aa
AA seq
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MRHLVWFRNDLRVADNPALHAALNDGDRVQAVYVDCPGQWRQHGNSPIQRDFLRRNLQAL
GERLATLGVPLTVLECEYFAEVPALLAGWVEQQGIDALYANRDIGVNERRRDKAVQQALA
IPCRVFNGDCVMNHGSITTQSGDMYRVFTPYSKAWLSALRAQGYRLLPVPEGRGEPVKAP
DIVLAGERKDSRAWPAGEEAARQALEGFCADPLLDYGEQRDFPAVAGTSRLSPYLALGVL
SPNQCLAAIEAALGSLPFGRGERGFAWLNELIWREFYRHLLVAFPVLSMNRAFKAETEAL
QWSNDDDAFSAWCEGNTGYPIVDAAMRCLRETGWMHNRLRMIVASFLTKDLHIDWRRGEA
WFMANLIDGELAANNGGWQWAAGTGADAAPYFRVFNPLTQSERFDPDGDFIRRWVPELAD
VPAKHIHAPHEWLRQHRREHDYAAPVVDHAKARLHAIAMFDALKDEEAV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcgacatttggtgtggtttagaaacgatctgcgggtggcggataacccggcgctgcat
gccgccctcaacgacggcgacagggtacaggcggtgtatgtcgactgtcccggccagtgg
cggcagcacggcaacagccccatccagcgggactttctccgccgcaacctgcaggccctg
ggggagcgcctggccaccctgggggtgcctttaacggtgctggagtgcgagtattttgcc
gaggtgccggcgctgcttgccggctgggtggaacagcaggggatcgacgccctttacgcc
aaccgggatatcggcgtgaacgagcgccgccgggacaaggcggtgcagcaggccctggcc
attccctgccgggtgttcaacggcgactgcgtgatgaaccacggcagcatcaccacccaa
agcggcgacatgtaccgggtgtttaccccctactccaaggcctggctgagcgccctcagg
gcccaggggtaccggctgctgccggtgcccgaggggcggggtgaacccgtcaaggcgcca
gacattgtgctggccggggagcgtaaagacagccgggcatggcccgccggcgaagaggct
gcgcggcaggccctcgaggggttttgcgccgacccgctgctcgattacggcgagcagcgg
gactttcccgcggtggcgggcaccagccggttatcgccgtatctagccctgggggtgctg
tcgcccaatcagtgtttggcggccatcgaggcggccctgggctcgctgcctttcggtcgg
ggtgagcggggctttgcctggctgaacgagcttatctggcgggaattctaccgccacctg
ctggtggcctttcccgtgctttccatgaaccgggccttcaaggcggaaaccgaggcgttg
caatggagcaacgacgacgatgcctttagcgcctggtgcgagggcaacaccggttatccc
atcgtggatgcggccatgcgctgcttgcgggaaaccggctggatgcacaaccggctgcgc
atgatagtggccagttttctcaccaaggatctgcatatcgattggcgccggggcgaggcc
tggtttatggccaacctgattgacggcgagttggccgccaacaacggtggctggcagtgg
gcggcggggaccggcgccgatgccgcgccttattttcgcgtgttcaacccgctgacccag
agtgagcgcttcgatcccgacggcgactttattcgccgctgggtgccggagctggcggac
gtgccggccaagcacattcatgcgccccacgagtggctgcgccagcaccggcgtgagcac
gactatgccgctccggtggtggatcatgccaaggcccggttgcacgccattgccatgttc
gatgccctgaaggacgaggaggcggtatga
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