Oceanimonas sp. GK1: GU3_12710
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Entry
GU3_12710 CDS
T01667
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
oce
Oceanimonas sp. GK1
Pathway
oce03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GU3_12710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oce03400
]
GU3_12710
Enzymes [BR:
oce01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GU3_12710
DNA repair and recombination proteins [BR:
oce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GU3_12710
Prokaryotic type
GU3_12710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEY02297
UniProt:
H2FXG5
LinkDB
All DBs
Position
complement(2765288..2765962)
Genome browser
AA seq
224 aa
AA seq
DB search
MNTTWSEAIGPEKQQPYFQQTMAAVTQARQAGKEIYPPEADVFNALKLTELAAVKVVMLG
QDPYHGPGQAHGLCFSVRPGIKVPPSLRNMYKELESDIPGFKAPQHGFLESWARQGVLML
NTVLTVEKGKAHSHAGLGWETFTDKVIQTVNEYCEGVVFLLWGSHAQKKGSHVDRRRHHV
LSAPHPSPLSAHRGFFGCRHFSKTNQLLEAQGKTPIDWQLPLAP
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccacctggagcgaggccatcggcccggaaaaacagcaaccctattttcagcag
accatggcggcggtcactcaggcccggcaggcgggcaaggagatttatccgcctgaagcc
gacgtgttcaatgctctcaagctgaccgagctggccgcagtcaaggtggtaatgctgggg
caggatccgtatcacggtcccggccaggcccacggcctgtgtttttccgtacgcccggga
ataaaagtgccgccgtcgctgcgcaatatgtataaagagctggaaagcgacattcccggt
tttaaagcacctcagcatggctttctggaatcttgggcccggcagggggtgctgatgctc
aataccgtgttaacggtggagaagggcaaggcccattcccatgctggactgggttgggag
acctttaccgataaggtgatccagacggtaaacgaatactgcgagggggtggtgtttttg
ctctggggcagccatgcccagaaaaagggcagccatgtcgaccgccggcgtcatcatgtg
ctgagtgcgcctcatcccagcccgctgtcggcccaccggggctttttcggctgccgccat
ttttccaagaccaaccagttgctggaagcccagggcaaaacccccattgactggcaactg
ccgctggcgccataa
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